Using the multivariate Hawkes process to study interactions between multiple species from camera trap data

Author:

Nicvert Lisa1ORCID,Donnet Sophie2ORCID,Keith Mark3ORCID,Peel Mike456ORCID,Somers Michael J.3ORCID,Swanepoel Lourens H.7ORCID,Venter Jan89ORCID,Fritz Hervé910ORCID,Dray Stéphane1ORCID

Affiliation:

1. Universite Claude Bernard Lyon 1 LBBE, UMR 5558, CNRS, VAS Villeurbanne France

2. Université Paris‐Saclay AgroParisTech, INRAE, UMR MIA Paris‐Saclay Palaiseau France

3. Eugène Marais Chair of Wildlife Management, Mammal Research Institute, Department of Zoology and Entomology University of Pretoria Pretoria South Africa

4. Agricultural Research Council Animal Production Institute, Rangeland Ecology Pretoria South Africa

5. School of Animal, Plant and Environmental Sciences University of the Witwatersrand Johannesburg South Africa

6. Applied Behavioural Ecology and Ecosystems Research Unit University of South Africa Florida South Africa

7. Department of Biological Sciences, Faculty of Science, Engineering and Agriculture University of Venda Thohoyandou South Africa

8. Department of Conservation Management, Faculty of Science, George Campus Nelson Mandela University George South Africa

9. REHABS, International Research Laboratory, CNRS‐NMU‐UCBL Nelson Mandela University George South Africa

10. Sustainability Research Unit Nelson Mandela University George South Africa

Abstract

AbstractInterspecific interactions can influence species' activity and movement patterns. In particular, species may avoid or attract each other through reactive responses in space and/or time. However, data and methods to study such reactive interactions have remained scarce and were generally limited to two interacting species. At this time, the deployment of camera traps opens new opportunities but adapted statistical techniques are still required to analyze interaction patterns with such data. We present the multivariate Hawkes process (MHP) and show how it can be used to analyze interactions between several species using camera trap data. Hawkes processes use flexible pairwise interaction functions, allowing us to consider asymmetries and variations over time when depicting reactive temporal interactions. After describing the theoretical foundations of the MHP, we outline how its framework can be used to study interspecific interactions with camera trap data. We design a simulation study to evaluate the performance of the MHP and of another existing method to infer interactions from camera trap‐like data. We also use the MHP to infer reactive interactions from real camera trap data for five species from South African savannas (impala Aepyceros melampus, greater kudu Tragelaphus strepsiceros, lion Panthera leo, blue wildebeest Connochaetes taurinus and Burchell's zebra Equus quagga burchelli). The simulation study shows that the MHP can be used as a tool to benchmark other methods of interspecific interaction inference and that this model can reliably infer interactions when enough data are considered. The analysis of real data highlights evidence of predator avoidance by prey and herbivore–herbivore attraction. Lastly, we present the advantages and limits of the MHP and discuss how it can be improved to infer attraction/avoidance patterns more reliably. As camera traps are increasingly used, the multivariate Hawkes process provides a promising framework to decipher the complexity of interactions structuring ecological communities.

Funder

Agence Nationale de la Recherche

Publisher

Wiley

Reference55 articles.

1. Albert M. Y.Bouret J.Chevallier M.Fromont F.Grammont T.Laloe C.Mascart et al.2021.“UnitEvents: Unitary Events Method with Delayed Coincidence Count (MTGAUE or Permutation Method) and Bernstein Lasso Method for Hawkes Processes.”https://sourcesup.renater.fr/frs/?group_id=3267.

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