Integrative taxonomy of a new species of Rhyacodrilus (Annelida: Clitellata: Rhyacodrilinae) from Tibet Plateau rivers, with a preliminary assessment of its phylogenetic position-Reference-Cited by-同舟云学术

Integrative taxonomy of a new species of Rhyacodrilus (Annelida: Clitellata: Rhyacodrilinae) from Tibet Plateau rivers, with a preliminary assessment of its phylogenetic position

Published:2023-03-17 Issue:2 Volume:5256 Page:125-138
ISSN:1175-5334
Container-title:Zootaxa
language:
Short-container-title:Zootaxa

Author:

JIANG WEI,ZHOU TINGTING^ORCID,WANG HONGZHU^ORCID,ERSÉUS CHRISTER^ORCID,CUI YONGDE^ORCID

Abstract

A new Qinghai-Tibet Plateau species, Rhyacodrilus tanggulaensis Jiang & Cui sp. nov. (Annelida, Clitellata, Naididae, Rhyacodrilinae), is described, and its phylogenetic relationships within the genus is assessed on the basis of both mitochondrial (16S rDNA, COⅠ gene) and nuclear (ITS2) markers. Data from 32 species of Naididae, representing 7 subfamilies and 25 genera are used. Ten species were chosen as outgroup taxa. The molecular data were analyzed by Bayesian inference. The new species is distinguished from other species of Rhyacodrilus by the following combination of characters: dorsal and ventral chaetae with distal tooth 2–3 times longer than proximal, spermathecal and penial chaetae present, atria long and tubular, atrial duct conspicuous. The analyses of the combined molecular data corroborate the close relationship between Naidinae and the rhyacodriline genera Rhyacodrilus, Monopylephorus, and Ainudrilus, and show that the new species is more closely related to R. falciformis, R pigueti, R. okamikae and R. subterraneus, than to R. sinicus, another Chinese species, R. hiemalis and R. coccineus.

Publisher

Magnolia Press

Subject

Animal Science and Zoology,Ecology, Evolution, Behavior and Systematics

Reference1 articles.

Achurra, A., Elejalde, M.A., Rodríguez, P. (2011) Phylogenetic analysis of oligochaete Tubificinae (Annelida: Clitellata) based on mitochondrial sequence data. Invertebrate Systematics, 25, 208–128. https://doi.org/10.1071/IS10040
Achurra, A. & Rodríguez, P. (2016) Syntopy in subterranean fauna: trophic specialisation in two new species of Rhyacodrilus Bretscher, 1901 (Annelida, Clitellata, Rhyacodrilinae). Zoologischer Anzeiger - A Journal of Comparative Zoology, 261, 1–11. https://doi.org/10.1016/j.jcz.2016.02.001
Bely, A.E. & Wray, G.A. (2004) Molecular phylogeny of naidid worms (Annelida: Clitellata) based on cytochrome oxidase I. Molecular Phylogenetics and Evolution, 30, 50–63. https://doi.org/10.1016/S1055-7903(03)00180-5
Bretscher, K. (1901). Beobachtungen über die Oligochaeten der Schweiz. Revue Suisse Zoologie, 9, 189–223. https://doi.org/10.5962/bhl.part.82517
Brinkhurst, R.O. & Jamieson, B.G.M. (1971) Aquatic Oligochaeta of the World. Oliver & Boyd, Edinburgh, 860 pp.
Brinkhurst, R.O. (1982) Additional aquatic Oligochaeta from Australia and New Zealand. Records of the Victoria Museum, 78, 1–16.
Chen, Y. (1940) Taxonomy and faunal relations of the limnitic Oligochaeta of China. Contributions from the Biological Laboratory of the Science Society of China, Zoological Series, 14, 1–132.
Černosvitov, L. (1941) Oligochaeta from Tibet. Proceedings of Zoological Society of London, 111, 281–287. https://doi.org/10.1111/j.1469-7998.1942.tb00052.x
Envall, I., Källersjö, M. & Erséus, C. (2006) Molecular evidence for the non-monophyletic status of Naidinae (Annelida, Clitellata, Tubificidae). Molecular Phylogenetics and Evolution, 40, 570–584. https://doi.org/10.1016/j.ympev.2006.03.021
Envall, I., Gustavsson. L.M. & Erséus, C. (2012) Genetic and morphological variation in Nais worms (Annelida, Clitellata, Naididae). Zoological Journal of the Linnean Society, 165, 495–520. https://doi.org/10.1111/j.1096-3642.2012.00828.x
Erséus, C., Rota, E., Matamoros. L. & de Wit, P. (2010a) Molecular phylogeny of Enchytraeidae (Annelida, Clitellata). Molecular Phylogenetics and Evolution, 57, 849–858. https://doi.org/10.1016/j.ympev.2010.07.005
Erséus, C., Envall, I., Marchese, M. & Gustavsson, L. (2010b) The systematic position of Opistocystidae (Annelida, Clitellata) revealed by DNA data. Molecular Phylogenetics and Evolution, 54, 309–313. https://doi.org/10.1016/j.ympev.2009.09.037
Erséus, C., Envall, I., de Wit, P. & Gustavsson, L.M. (2017) Molecular data reveal a tropical freshwater origin of Naidinae (Annelida, Clitellata, Naididae). Molecular Phylogenetics and Evolution, 115, 115–127. https://doi.org/10.1016/j.ympev.2017.07.016
Erséus, C., Williams, B.W., Horn, K.M., Halanych, K.M., Santos, S.R., James, S.W., Creuzé des Châtelliers, M. & Anderson, F.E. (2020) Phylogenomic analyses reveal a Palaeozoic radiation and support a freshwater origin for clitellate annelids. Zoologica Scripta, 49, 614–640. https://doi.org/10.1111/zsc.12426
Folmer, O., Black. M., Hoeh, W., Lutz, R. & Vrijenhoek, R. (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metozoan invertebrates. Molecular Marine Biology and Biotechnology, 3 294–299.
Giani, N. & Rodríguez, P. (1988) Description de quelques espèces nouvelles de Tubificidae (Oligochaeta) de grottes et de sources karstiques de la péninsule ibérique. Stygologia, 4, 122–137.
Giani, N., Sambugar, B., Martínez-Ansemil, E., Martin, P. & Schmelz R.M. (2011) The groundwater oligochaetes (Annelida, Clitellata) of Slovenia. Subterranean Biology, 9, 85–102. https://doi.org/10.3897/subtbiol.9.2512
He, X.B. (2011) s.n. In: Studies on faunae of aquatic Oligochaeta (Annelida) in Tibet and four large rivers of China. PhD Thesis, Institute of Hydrobiology, Chinese Academy of Sciences, Wuhan, pp. 130–132. [in Chinese with English abstract]
Juget, J. (1987) Contribution to the study of the Rhyacodrilinae (Tubificidae, Oligochaeta), with description of two new stygobiont species from the alluvial plain of the French upper Rhone, Rhyacodrilus amphigenus, sp. n. and Rhizodriloides phreaticola, g. n., sp. n. Hydrobiologia, 155, 107–118. https://doi.org/10.1007/BF00025635
Kalyaanamoorthy, S., Minh, B.Q., Wong, T.K.F., Haeseler, A.V. & Jermiin, L.S. (2017) ModelFinder: fast model selection for accurate phylogenetic estimates. Nature Methods 14, 587–589. https://doi.org/10.1038/nmeth.4285
Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30, 772–780. https://doi.org/10.1093/molbev/mst010
Košel, V. (1980) Rhyacodrilus carsticus sp. n. (Oligochaeta, Tubificidae) from the Slovakian Karst. Biologia 35, 609–612.
Kumar, S., Stecher, G. & Tamura, K. (2016) MEGA7: Molecular Evolutionary Genetics Analysis version 7.0 for bigger datasets. Molecular Biology and Evolution, 33, 1870–1874. https://doi.org/10.1093/molbev/msw054
Kvist, S., Sarkar, I.N. & Erséus, C. (2010) Genetic variation and phylogeny of the cosmopolitan marine genus Tubificoides (Annelida: Clitellata: Naididae: Tubificinae). Molecular Phylogenetics and Evolution, 57, 687–702. https://doi.org/10.1016/j.ympev.2010.08.018
Katoh, K. & Standley, D.M. (2013) MAFFT multiple sequence alignment software version 7: improvements in performance and usability. Molecular Biology and Evolution, 30, 772–780. https://doi.org/10.1093/molbev/mst010
Lafont, M. & Juget, J. (1993) Rhyacodrilus ardierae n.sp., a new species of Tubificidae (Oligochaeta) from the River Ardières (France, tributary of the River Saone). Bulletin de la Société Zoologique de France, 118, 115–123.
Lanfear, R., Frandsen, P.B., Wright, A.M., Senfeld, T. & Calcott, B. (2016) PartitionFinder 2: new methods for selecting partitioned models of evolution for molecular and morphological phylogenetic analyses. Molecular Biology and Evolution, 34, 772–773. https://doi.org/10.1093/molbev/msw260
Liu, Y. & Erseus, C. (2017) New specific primers for amplification of the Internal Transcribed Spacer region in Clitellata (Annelida). Ecology Evolution, 7, 10421–10439. https://doi.org/10.1002/ece3.3212
Liu, Y., Fend, S.V., Martinsson, S., Luo, X., Ohtaka, A. & Erséus, C. (2017) Multi-locus phylogenetic analysis of the genus Limnodrilus (Annelida: Clitellata: Naididae). Molecular Phylogenetics and Evolution, 112, 244–257. https://doi.org/10.1016/j.ympev.2017.04.019
Martin, P., Martínez-ansemil E. & Sambugar, B. (2010) The Baikalian genus Rhyacodriloides in Europe: phylogenetic assessment of Rhyacodriloidinae subfam. n. within the Naididae (Annelida). Zoologica Scripta, 39, 462–482. https://doi.org/10.1111/j.1463-6409.2010.00434.x
Martinsson, S., Achurra, A., Svensson, M. & Erséus, C. (2013) Integrative taxonomy of the freshwater worm Rhyacodrilus falciformis s.l. (Clitellata: Naididae), with the description of a new species. Zoologica Scripta, 42, 612–622. https://doi.org/10.1111/zsc.12032
Michaelsen, W. (1935) Oligochaeten aus den Seen des Zentral-Altai. Issledovanija ozer SSSR, 8, 298–302.
Martínez-Ansemil, E., Giacomazzi, F. & Sambugar, B. (2016) Groundwater oligochaetes (Annelida: Clitellata) of the Dinaric region (South-East Europe). Biologia, 71, 24–30. https://doi.org/10.1515/biolog-2016-0009
Nylander, J.A.A., Erséus, C. & Källersjö, M. (1999) A test of monophyly of the gutless Phallodrilinae (Oligochaeta, Tubificidae) and the use of a 573-bp region of the mitochondrial cytochrome oxidase I gene in analysis of annelid phylogeny. Zoologica Scripta, 28, 305–313. https://doi.org/10.1046/j.1463-6409.1999.00001.x
Ohtaka, A. (1995) A new Species of the genus Rhyacodrilus Bretscher (Oligochaeta, Tubificidae) from Japanese lakes. Zoological Science, 12, 491–498. https://doi.org/10.2108/zsj.12.491
Palumbi, S. (1996) Nucelic acids II: the polymerase chain reaction. In: Hillis, D.M., Moritz, C. & Mable, B.K. (Eds.), Molecular Systematics. Oxford University Pres, Oxford, pp. 205–247. https://doi.org/10.2307/1447682
Rodríguez, P. & Fend, S.V. (2013) New species of Rhyacodrilus (Annelida: Clitellata: Rhyacodrilinae) of North America, with re-description of R. sodalis (Eisen, 1879). Zootaxa, 3664 (1), 1–44. https://doi.org/10.11646/zootaxa.3664.1.1
Ronquist, F., Teslenko, M., Mark, P.V., Ayres, D.L., Darling, A., Höhna, S., Larget, B., Liu, L., Suchard, M. & Huelsenbeck, J. (2012) MrBayes 3.2: Efficient Bayesian Phylogenetic Inference and Model Choice Across a Large Model Space. Systematic Biology, 61, 539–542. https://doi.org/10.1093/sysbio/sys029
Semernoy, V.P. (2004) Oligochaeta of Lake Baikal. Russian Academy of Sciences, Siberian Division, Limnological Institute, Novosibirsk, Nauka, 527 pp.
Siddall, M.E., Apakupakul, K., Burreson, E.M., Coates, K.A., Erséus, C., Gelder, S.R., Kallersjö, M. & Trapido-Rosenthal, H. (2001) Validating Livanow: molecular data agree that leeches, branchiobdellidans, and Acanthobdella peledina form a monophyletic group of oligochaetes. Molecular Phylogenetics and Evolution, 21, 346–351. https://doi.org/10.1006/mpev.2001.1021
Sjölin, E., Erséus, C. & Källersjö, M. (2005) Phylogeny of Tubificidae (Annelida, Clitellata) based on mitochondrial and nuclear sequence data. Molecular Phylogenetics and Evolution, 35, 431–441. https://doi.org/10.1016/j.ympev.2004.12.018
Stephenson, J. (1909) Report on a collection of the small Oligochaeta made by Capt. F. H. Stewart, I.M.S., in Tibet. Records of the Indian Museum, 3, 105–114. https://doi.org/10.26515/rzsi/v3/i2/1909/163259
Timm, T., Arslan, N., Rüzgar, M., Martinsson, S. & Erséus, C. (2013) Oligochaeta (Annelida) of the profundal of Lake Hazar (turkey), with description of Potamothrix alatus hazaricus n. ssp. Zootaxa, 3716 (2), 144–156. https://doi.org/10.11646/zootaxa.3716.2.2
Timm, T. (2017) Aquatic microdrile Oligochaeta (Annelida, Clitellata): New nominal taxa and combinations since 1984. Zootaxa, 4282 (3), 401–452. https://doi.org/10.11646/zootaxa.4282.3.1
Vejdovský, F. (1876) Beiträge zur Oligochaetenfauna Böhmens. Sitzungsberichte der Königlichen Böhmischen Gesellschaft der Wissenschaften in Prag, 1875, 191–201.
Wang, H.Z. (2002) Studies on taxonomy, distribution and ecology of microdrile oligochaetes of China, with description of two new species from the vicinity of the Great Wall Station of China, Antarctica. Higher Education Press, Beijing, 102 pp.
Zhang, D., Gao, F., Jakovlić, I., Zou, H., Zhang, J., Li, W.X. & Wang, G.T. (2020) PhyloSuite: An integrated and scalable desktop platform for streamlined molecular sequence data management and evolutionary phylogenetics studies. Molecular Ecology Resources, 20, 348–355.