LINE-1 protein localization and functional dynamics during the cell cycle

Author:

Mita Paolo1ORCID,Wudzinska Aleksandra1,Sun Xiaoji1,Andrade Joshua2,Nayak Shruti2,Kahler David J3,Badri Sana4,LaCava John15ORCID,Ueberheide Beatrix12,Yun Chi Y3,Fenyö David1ORCID,Boeke Jef D1ORCID

Affiliation:

1. Institute of Systems Genetics (ISG), Department of Biochemistry and Molecular Pharmacology, NYU Langone Health, New York, United States

2. Proteomics laboratory, NYU Langone Health, New York, United States

3. High Throughput Biology (HTB) Laboratory, NYU Langone Health, New York, United States

4. Department of Pathology, NYU Langone Health, New York, United States

5. Laboratory of Cellular and Structural Biology, The Rockefeller University, New York, United States

Abstract

LINE-1/L1 retrotransposon sequences comprise 17% of the human genome. Among the many classes of mobile genetic elements, L1 is the only autonomous retrotransposon that still drives human genomic plasticity today. Through its co-evolution with the human genome, L1 has intertwined itself with host cell biology. However, a clear understanding of L1’s lifecycle and the processes involved in restricting its insertion and intragenomic spread remains elusive. Here we identify modes of L1 proteins’ entrance into the nucleus, a necessary step for L1 proliferation. Using functional, biochemical, and imaging approaches, we also show a clear cell cycle bias for L1 retrotransposition that peaks during the S phase. Our observations provide a basis for novel interpretations about the nature of nuclear and cytoplasmic L1 ribonucleoproteins (RNPs) and the potential role of DNA replication in L1 retrotransposition.

Funder

National Institutes of Health

National Cancer Institute

NYSTEM

Publisher

eLife Sciences Publications, Ltd

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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