Identification of Genetic Mutations in Human Lung Cancer by Targeted Sequencing

Author:

Feng Hongxiang1,Wang Xiaowei1,Zhang Zhenrong1,Tang Chuanning2,Ye Hua2,Jones Lindsey3,Lou Feng2,Zhang Dandan2,Jiang Shouwen2,Sun Hong2,Dong Haichao2,Zhang Guangchun2,Liu Zhiyuan2,Dong Zhishou2,Guo Baishuai2,Yan He2,Yan Chaowei2,Wang Lu2,Su Ziyi2,Li Yangyang2,Nandakumar Vijayalakshmi3,Huang Xue F.3,Chen Si-Yi3,Liu Deruo1

Affiliation:

1. Department of Thoracic Surgery, China-Japan Friendship Hospital, Beijing, China.

2. San Valley Biotechnology Inc., Beijing, China.

3. Norris Comprehensive Cancer Center, Department of Molecular Microbiology and Immunology, Keck School of Medicine, University of Southern California, Los Angeles, CA, USA.

Abstract

Lung cancer remains the most prevalent malignancy and the primary cause of cancer-related deaths worldwide. Unique mutations patterns can be found in lung cancer subtypes, in individual cancers, or within a single tumor, and drugs that target these genetic mutations and signal transduction pathways are often beneficial to patients. In this study, we used the Ion Torrent AmpliSeq Cancer Panel to sequence 737 loci from 45 cancer-related genes and oncogenes to identify genetic mutations in 48 formalin-fixed, paraffin-embedded (FFPE) human lung cancer samples from Chinese patients. We found frequent mutations in EGFR, KRAS, PIK3CA, and TP53 genes. Moreover, we observed that a portion of the lung cancer samples harbored two or more mutations in these key genes. This study demonstrates the feasibility of using the Ion Torrent sequencing to efficiently identify genetic mutations in individual tumors for targeted lung cancer therapy.

Publisher

SAGE Publications

Subject

Cancer Research,Oncology

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