Activity-induced gene expression in the human brain

Author:

Chatterjee SnehajyotiORCID,Park Brian J.,Vanrobaeys YannORCID,Heiney Shane A.ORCID,Rhone Ariane E.ORCID,Nourski Kirill V.ORCID,Langmack LucyORCID,Mukherjee UtsavORCID,Kovach Christopher K.ORCID,Kocsis ZsuzsannaORCID,Kikuchi YukikoORCID,Petkov Christopher I.ORCID,Hefti Marco M.ORCID,Bahl EthanORCID,Michaelson Jacob JORCID,Kawasaki HirotoORCID,Oya HiroyukiORCID,Howard Matthew A.,Nickl-Jockschat ThomasORCID,Lin Li-ChunORCID,Abel TedORCID

Abstract

AbstractActivity-induced gene expression underlies synaptic plasticity and brain function. Here, using molecular sequencing techniques, we define activity-dependent transcriptomic and epigenomic changes at the tissue and single-cell level in the human brain following direct electrical stimulation of the anterior temporal lobe in patients undergoing neurosurgery. Genes related to transcriptional regulation and microglia-specific cytokine activity displayed the greatest induction pattern, revealing a precise molecular signature of neuronal activation in the human brain.Key findingsElectrical stimulation of the human cortex allows the identification of an activity-dependent gene expression signature.Neurons and microglia in the human brain exhibit distinct transcriptional signatures following electrical stimulation.Single nuclear chromatin accessibility studies reveal cell-type-specific epigenomic changes and specific transcription factor motifs in microglia.

Publisher

Cold Spring Harbor Laboratory

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