His-MMDM: Multi-domain and Multi-omics Translation of Histopathology Images with Diffusion Models

Author:

Li ZhongxiaoORCID,Su Tianqi,Zhang Bin,Han Wenkai,Zhang Sibin,Sun Guiyin,Cong Yuwei,Chen Xin,Qi Jiping,Wang Yujie,Zhao Shiguang,Meng Hongxue,Liang Peng,Gao Xin

Abstract

AbstractGenerative AI (GenAI) has advanced computational pathology through various image translation models. These models synthesize histopathological images from existing ones, facilitating tasks such as color normalization and virtual staining. Current models, while effective, are mostly dedicated to specific source-target domain pairs and lack scalability for multi-domain translations. Here we introduce His-MMDM, a diffusion model-based framework enabling multi-domain and multi-omics histopathological image translation. His-MMDM can translate images across an unlimited number of categorical domains, enabling new applications like the translation of tumor images across various tumor types, while performing comparably to dedicated models on previous tasks such as transforming cryosectioned images to formalin-fixed paraffin-embedded (FFPE) ones. Additionally, it can perform genomics- and/or transcriptomics-guided editing of histopathological images, illustrating the impact of driver mutations and oncogenic pathway alterations on tissue histopathology. These versatile capabilities position His-MMDM as a versatile tool in the GenAI toolkit for future pathologists.

Publisher

Cold Spring Harbor Laboratory

Reference88 articles.

1. Rombach, R. , Blattmann, A. , Lorenz, D. , Esser, P. & Ommer, B. in Proceedings of the IEEE/CVF Conference on Computer Vision and Pattern Recognition. 10684–10695.

2. Midjourney Inc. Midjourney, (2022).

3. Betker, J. et al. Improving image generation with better captions. Computer Science. https://cdn.openai.com/papers/dall-e-3.pdf 2, p8 (2023).

4. The dawn of lmms: Preliminary explorations with gpt-4v (ision);arXiv preprint,2023

5. Zhang, L. , Rao, A. & Agrawala, M. in Proceedings of the IEEE/CVF International Conference on Computer Vision. 3836–3847.

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.5亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2024 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3