Reference genome of the long-jawed orb-weaver, Tetragnatha versicolor (Araneae: Tetragnathidae)

Author:

Adams Seira A123ORCID,Graham Natalie R1ORCID,Holmquist Anna J1ORCID,Sheffer Monica M45ORCID,Steigerwald Emma C16ORCID,Sahasrabudhe Ruta7ORCID,Nguyen Oanh7ORCID,Beraut Eric8ORCID,Fairbairn Colin8,Sacco Samuel8ORCID,Seligmann William8ORCID,Escalona Merly9ORCID,Shaffer H Bradley1011ORCID,Toffelmier Erin1011ORCID,Gillespie Rosemary G1ORCID

Affiliation:

1. Department of Environmental Science, Policy and Management, University of California , Berkeley, CA , United States

2. Center for Population Biology, University of California , Davis, CA , United States

3. Department of Evolution and Ecology, University of California , Davis, CA , United States

4. Department of Biology, University of Washington , Seattle, WA , United States

5. eScience Institute, University of Washington , Seattle, WA , United States

6. Museum of Vertebrate Zoology, University of California , Berkeley, CA , United States

7. DNA Technologies and Expression Analysis Core Laboratory, Genome Center, University of California , Davis, CA , United States

8. Department of Ecology and Evolutionary Biology, University of California , Santa Cruz, CA , United States

9. Department of Biomolecular Engineering, University of California , Santa Cruz, CA , United States

10. Department of Ecology and Evolutionary Biology, University of California , Los Angeles, CA , United States

11. La Kretz Center for California Conservation Science, Institute for Environment and Sustainability, University of California , Los Angeles, CA , United States

Abstract

Abstract Climate-driven changes in hydrological regimes are of global importance and are particularly significant in riparian ecosystems. Riparian ecosystems in California provide refuge to many native and vulnerable species within a xeric landscape. California Tetragnatha spiders play a key role in riparian ecosystems, serving as a link between terrestrial and aquatic elements. Their tight reliance on water paired with the widespread distributions of many species make them ideal candidates to better understand the relative role of waterways versus geographic distance in shaping the population structure of riparian species. To assist in better understanding population structure, we constructed a reference genome assembly for Tetragnatha versicolor using long-read sequencing, scaffolded with proximity ligation Omni-C data. The near-chromosome-level assembly is comprised of 174 scaffolds spanning 1.06 Gb pairs, with a scaffold N50 of 64.1 Mb pairs and BUSCO completeness of 97.6%. This reference genome will facilitate future study of T. versicolor population structure associated with the rapidly changing environment of California.

Funder

University of California

Publisher

Oxford University Press (OUP)

Subject

Genetics (clinical),Genetics,Molecular Biology,Biotechnology

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