Anthriscus sylvestris Deoxypodophyllotoxin Synthase Involved in the Podophyllotoxin Biosynthesis

Author:

Kobayashi Keisuke1ORCID,Yamamura Masaomi12ORCID,Mikami Bunzo1,Shiraishi Akira3,Kumatani Masato1,Satake Honoo3,Ono Eiichiro4ORCID,Umezawa Toshiaki1ORCID

Affiliation:

1. Research Institute for Sustainable Humanosphere, Kyoto University , Gokasho, Uji, Kyoto, 611-0011 Japan

2. Faculty of Bioscience and Bioindustry, Tokushima University , 2-1, Minami-josanjima-cho, Tokushima, 770-8502 Japan

3. Bioorganic Research Institute, Suntory Foundation for Life Sciences , 8-1-1 Seikadai, Seika-cho, Soraku-gun, Kyoto, 619-0284 Japan

4. Research Institute, Suntory Global Innovation Center Ltd. , 8-1-1 Seikadai, Seika-cho, Soraku-gun, Kyoto, 619-0284 Japan

Abstract

Abstract Tetrahydrofuran ring formation from dibenzylbutyrolactone lignans is a key step in the biosynthesis of aryltetralin lignans including deoxypodophyllotoxin and podophyllotoxin. Previously, Fe(II)- and 2-oxoglutarate-dependent dioxygenase (2-ODD) from Podophyllum hexandrum (Himalayan mayapple, Berberidaceae) was found to catalyze the cyclization of a dibenzylbutyrolactone lignan, yatein, to give deoxypodophyllotoxin and designated as deoxypodophyllotoxin synthase (DPS). Recently, we reported that the biosynthesis of deoxypodophyllotoxin and podophyllotoxin evolved in a lineage-specific manner in phylogenetically unrelated plant species such as P. hexandrum and Anthriscus sylvestris (cow parsley, Apiaceae). Therefore, a comprehensive understanding of the characteristics of DPSs that catalyze the cyclization of yatein to deoxypodophyllotoxin in various plant species is important. However, for plant species other than P. hexandrum, the isolation of the DPS enzyme gene and the type of the enzyme, e.g. whether it is 2-ODD or another type of enzyme such as cytochrome P-450, have not been reported. In this study, we report the identification and characterization of A. sylvestris DPS (AsDPS). Phylogenetic analysis showed that AsDPS belonged to the 2-ODD superfamily and shared moderate amino acid sequence identity (40.8%) with P. hexandrum deoxypodophyllotoxin synthase (PhDPS). Recombinant protein assay indicated that AsDPS and PhDPS differ in terms of the selectivity of substrate enantiomers. Protein modeling using AlphaFold2 and site-directed mutagenesis indicated that the Tyr305 residue of AsDPS probably contributes to substrate recognition. This study advances our understanding of the podophyllotoxin biosynthetic pathway in A. sylvestris and provides new insight into 2-ODD involved in plant secondary (specialized) metabolism.

Funder

Japan Society for the Promotion of Science

Publisher

Oxford University Press (OUP)

Subject

Cell Biology,Plant Science,Physiology,General Medicine

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Revisiting Plant Metabolite Functions;Plant And Cell Physiology;2023-12-01

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