The ELIXIR Core Data Resources: fundamental infrastructure for the life sciences

Author:

Drysdale Rachel1,Cook Charles E2,Petryszak Robert2,Baillie-Gerritsen Vivienne3,Barlow Mary2,Gasteiger Elisabeth3,Gruhl Franziska4,Haas Jürgen5,Lanfear Jerry1,Lopez Rodrigo2,Redaschi Nicole3,Stockinger Heinz4,Teixeira Daniel46,Venkatesan Aravind2,Bateman Alex,Bridge Alan,Cochrane Guy,Finn Rob,Glöckner Frank Oliver,Hanauer Marc,Keane Thomas,Leach Andrew,Licata Luana,Oksvold Per,Orchard Sandra,Orengo Christine,Parkinson Helen,Persson Bengt,Porras Pablo,Rambla Jordi,Rath Ana,Rodwell Charlotte,Sarkans Ugis,Schomburg Dietmar,Sillitoe Ian,Spalding Dylan,Uhlén Mathias,Velankar Sameer,Vizcaíno Juan Antonio,von Feilitzen Kalle,von Mering Christian,Yates Andrew,Blomberg Niklas1ORCID,Durinx Christine4,McEntyre Johanna2,

Affiliation:

1. ELIXIR Hub, South Building, Wellcome Genome Campus, Hinxton, Cambridgeshire, CB10 1SD, UK

2. European Molecular Biology Laboratory, European Bioinformatics Institute (EMBL-EBI), Wellcome Genome Campus, Hinxton, Cambridge CB10 1SD, UK

3. SIB Swiss Institute of Bioinformatics, CMU, 1211 Geneva, Switzerland

4. SIB Swiss Institute of Bioinformatics Quartier Sorge—Bâtiment Amphipôle, 1015 Lausanne, Switzerland

5. SIB Swiss Institute of Bioinformatics & Biozentrum, University of Basel, 4056 Basel, Switzerland

6. Hôpitaux Universitaires de Genève, Rue Gabrielle-Perret-Gentil 4, 1205 Geneva, Switzerland

Abstract

Abstract Supplementary information Supplementary data are available at Bioinformatics online.

Funder

European Union’s Horizon 2020 research

innovation program, ELIXIR- EXCELERATE

EMBL and SIB

Publisher

Oxford University Press (OUP)

Subject

Computational Mathematics,Computational Theory and Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Statistics and Probability

Reference36 articles.

1. Data management: a global coalition to sustain core data;Anderson;Nature,2017

2. ArrayExpress update - from bulk to single-cell expression data;Athar;Nucleic Acids Res,2019

3. The Protein Data Bank: a historical perspective;Berman;Acta Crystallogr. A,2008

4. ELIXIR position paper on FAIR data management in the life sciences [version 1; not peer reviewed];Blomberg;F1000Research,2017

5. Perspective: sustaining the big-data ecosystem;Bourne;Nature,2015

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