The UNITE database for molecular identification of fungi: handling dark taxa and parallel taxonomic classifications

Author:

Nilsson Rolf Henrik1,Larsson Karl-Henrik2,Taylor Andy F S3,Bengtsson-Palme Johan456ORCID,Jeppesen Thomas S7,Schigel Dmitry7,Kennedy Peter8,Picard Kathryn9,Glöckner Frank Oliver10,Tedersoo Leho11,Saar Irja11,Kõljalg Urmas11,Abarenkov Kessy12

Affiliation:

1. University of Gothenburg, Department of Biological and Environmental Sciences, Gothenburg Global Biodiversity Centre, Box 461, 405 30 Gothenburg, Sweden

2. Natural History Museum, University of Oslo, P.O. Box 1172, Blindern, 0318 Oslo, Norway

3. The James Hutton Institute and University of Aberdeen, Aberdeen, UK

4. Wisconsin Institute for Discovery, University of Wisconsin-Madison, 330 North Orchard Street, Madison, WI 53715, USA

5. Centre for Antibiotic Resistance research (CARe) at University of Gothenburg, Gothenburg, Sweden

6. Department of Infectious Diseases, Sahlgrenska Academy, University of Gothenburg, Guldhedsgatan 10, SE-413 46 Gothenburg, Sweden

7. Global Biodiversity Information Facility, Universitetsparken 15, DK-2100 Copenhagen Ø, Denmark

8. Department of Plant and Microbial Biology, University of Minnesota, 1479 Gortner Avenue, St. Paul, MN 55108, USA

9. Department of Botany, National Museum of Natural History, Smithsonian Institution, Washington, DC 20013, USA

10. Jacobs University Bremen and MPI for Marine Microbiology, Celsiusstr. 1, D-28359 Bremen, Germany

11. University of Tartu, Institute of Ecology and Earth Sciences, 40 Lai Street, 51005 Tartu, Estonia

12. Natural History Museum and Botanical Garden, University of Tartu, 46 Vanemuise Street, 51003 Tartu, Estonia

Funder

Alfred P. Sloan Foundation

Swedish Research Council of Environment, Agricultural Sciences, and Spatial Planning

Publisher

Oxford University Press (OUP)

Subject

Genetics

Reference34 articles.

1. Fungal diversity revisited: 2.2 to 3.8 million species;Hawksworth;Microbiol. Spec.,2017

2. Nuclear ribosomal internal transcribed spacer (ITS) region as a universal DNA barcode marker for Fungi;Schoch;Proc. Natl. Acad. Sci. Biol.,2012

3. The international nucleotide sequence database collaboration;Karsch-Mizrachi;Nucleic Acids Res.,2017

4. Towards a unified paradigm for sequence-based identification of fungi;Kõljalg;Mol. Ecol.,2013

5. Defining operational taxonomic units using DNA barcode data;Blaxter;Philos. Trans. R. Soc. B.,2005

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