Future-proofing environmental DNA and trait-based predictions of food webs

Author:

Pereira Cátia Lúcio1ORCID,Ersoy Zeynep2ORCID,Gilbert M Thomas P34ORCID,Gravel Dominique5ORCID,Araújo Miguel B67ORCID,Matias Miguel G89ORCID

Affiliation:

1. Rui Nabeiro Biodiversity Chair, MED – Mediterranean Institute for Agriculture, Environment and Development & CHANGE Global Change and Sustainability Institute, Institute for Advanced Studies and Research, University of Évora, Évora, Portugal, Globe Institute, University of Copenhagen, Copenhagen, Denmark and Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales (MNCN-CSIC) , Madrid , Spain

2. Rui Nabeiro Biodiversity Chair, MED – Mediterranean Institute for Agriculture, Environment and Development & CHANGE Global Change and Sustainability Institute, Institute for Advanced Studies and Research, University of Évora, Évora, Portugal, FEHM-Lab (Freshwater Ecology, Hydrology and Management), and Institut de Recerca de la Biodiversitat (IRBio), Universitat de Barcelona (UB) , Barcelona , Spain

3. Globe Institute, University of Copenhagen , Copenhagen , Denmark

4. University Museum, NTNU , Trondheim , Norway

5. University of Sherbrooke , Québec , Canada

6. Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales (MNCN-CSIC) , Madrid , Spain

7. Rui Nabeiro Biodiversity Chair, MED – Mediterranean Institute for Agriculture, Environment and Development & CHANGE Global Change and Sustainability Institute, Institute for Advanced Studies and Research, University of Évora , Évora , Portugal

8. Ramón y Cajal Research Fellow at Departamento de Biogeografía y Cambio Global, Museo Nacional de Ciencias Naturales (MNCN-CSIC) , Madrid , Spain

9. Visiting Researcher at the Rui Nabeiro Biodiversity Chair, MED – Mediterranean Institute for Agriculture, Environment and Development & CHANGE Global Change and Sustainability Institute, Institute for Advanced Studies and Research, University of Évora , Évora , Portugal

Abstract

Abstract Food webs represent trophic interactions within ecosystems. Matching traits of consumers and resources helps infer trophic interactions and food-web properties. Environmental (e)DNA, commonly used for detecting species occurrences, is rarely used in trait-matching studies because abundance estimates and descriptions of relevant traits are generally missing. We synthesized recent literature on inferences of trophic interactions with eDNA and trait matching to identify challenges and opportunities for coupled eDNA–trait recording schemes. Our case study shows how coupling eDNA and trait data collection improves the ability to characterize greater numbers of food webs across multiple scales ranging from spatiotemporal to trait variation. Future-proofing eDNA data sets requires the collection of new traits or the compilation of existing trait data at spatiotemporal scales that are relevant to detect current and future changes in food webs and ecosystems.

Funder

Portuguese Science and Technology Foundation

European Regional Development Fund

Ministerio de Ciencia e Innovación

Publisher

Oxford University Press (OUP)

Subject

General Agricultural and Biological Sciences

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