A Genome-Wide Association Study of Respiratory Syncytial Virus Infection Severity in Infants

Author:

Johnson Mari12ORCID,Chelysheva Irina12ORCID,Öner Deniz3,McGinley Joseph12ORCID,Lin Gu-Lung12,O’Connor Daniel12,Robinson Hannah12,Drysdale Simon B12,Gammin Emma12,Vernon Sophie12,Muller Jill12,Wolfenden Helen4,Westcar Sharon4,Anguvaa Lazarus5,Thwaites Ryan S6,Bont Louis7,Wildenbeest Joanne7,Martinón-Torres Federico8910ORCID,Aerssens Jeroen3,Openshaw Peter J M6,Pollard Andrew J12

Affiliation:

1. Oxford Vaccine Group, Department of Paediatrics, University of Oxford

2. NIHR Oxford Biomedical Research Centre and Oxford University Hospitals NHS Foundation Trust , United Kingdom

3. Biomarkers Infectious Diseases, Janssen Pharmaceutica NV , Beerse , Belgium

4. Royal Berkshire NHS Foundation Trust , Reading

5. Milton Keynes General Hospital NHS Trust

6. National Heart and Lung Institute, Imperial College London , United Kingdom

7. Department of Paediatric Infectious Diseases and Immunology, Wilhelmina Children's Hospital, University Medical Centre Utrecht , Netherlands

8. Translational Pediatrics and Infectious Diseases, Department of Pediatrics, Hospital Clínico Universitario de Santiago de Compostela

9. Genetics, Vaccines and Infections Research Group, Instituto de Investigación Sanitaria de Santiago, Universidade de Santiago de Compostela

10. Centro de Investigación Biomédica en Red de Enfermedades Respiratorias, Instituto de Salud Carlos III , Madrid , Spain

Abstract

Abstract Background Respiratory syncytial virus (RSV) is a significant cause of infant morbidity and mortality worldwide. Most children experience at least one 1 RSV infection by the age of two 2 years, but not all develop severe disease. However, the understanding of genetic risk factors for severe RSV is incomplete. Consequently, we conducted a genome-wide association study of RSV severity. Methods Disease severity was assessed by the ReSVinet scale, in a cohort of 251 infants aged 1 week to 1 year. Genotyping data were collected from multiple European study sites as part of the RESCEU Consortium. Linear regression models were used to assess the impact of genotype on RSV severity and gene expression as measured by microarray. Results While no SNPs reached the genome-wide statistical significance threshold (P < 5 × 10−8), we identified 816 candidate SNPs with a P-value of <1 × 10−4. Functional annotation of candidate SNPs highlighted genes relevant to neutrophil trafficking and cytoskeletal functions, including LSP1 and RAB27A. Moreover, SNPs within the RAB27A locus significantly altered gene expression (false discovery rate, FDR P < .05). Conclusions These findings may provide insights into genetic mechanisms driving severe RSV infection, offering biologically relevant information for future investigations.

Publisher

Oxford University Press (OUP)

Reference40 articles.

1. The burden of respiratory syncytial virus in healthy term-born infants in Europe: a prospective birth cohort study;Wildenbeest;Lancet Respir Med,2023

2. Viral bronchiolitis;Florin;Lancet,2017

3. Fatality rates in published reports of RSV hospitalizations among high-risk and otherwise healthy children;Welliver;Curr Med Res Opin,2008

4. The burden of respiratory syncytial virus infection in young children;Hall;N Engl J Med,2009

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