Diagnostic Prediction of portal vein thrombosis in chronic cirrhosis patients using data-driven precision medicine model

Author:

Li Ying1,Gao Jing23,Zheng Xubin4,Nie Guole1,Qin Jican4,Wang Haiping1,He Tao5,Wheelock Åsa236,Li Chuan-Xing23,Cheng Lixin78,Li Xun1

Affiliation:

1. The First Hospital of Lanzhou University , Lanzhou , China

2. Respiratory Medicine Unit , Department of Medicine & Centre for Molecular Medicine, , Stockholm , Sweden

3. Karolinska Institutet , Department of Medicine & Centre for Molecular Medicine, , Stockholm , Sweden

4. School of Computing and Information Technology , Great Bay University, Guangdong , China

5. Jilin Hepato-Biliary Diseases Hospital , Changchun , China

6. Department of Respiratory Medicine and Allergy, Karolinska University Hospital , Stockholm , Sweden

7. Shenzhen People's Hospital , The First Affiliated Hospital of Southern University of Science and Technology, , Shenzhen , China

8. The Second Clinical Medical College of Jinan University , The First Affiliated Hospital of Southern University of Science and Technology, , Shenzhen , China

Abstract

Abstract Background Portal vein thrombosis (PVT) is a significant issue in cirrhotic patients, necessitating early detection. This study aims to develop a data-driven predictive model for PVT diagnosis in chronic hepatitis liver cirrhosis patients. Methods We employed data from a total of 816 chronic cirrhosis patients with PVT, divided into the Lanzhou cohort (n = 468) for training and the Jilin cohort (n = 348) for validation. This dataset encompassed a wide range of variables, including general characteristics, blood parameters, ultrasonography findings and cirrhosis grading. To build our predictive model, we employed a sophisticated stacking approach, which included Support Vector Machine (SVM), Naïve Bayes and Quadratic Discriminant Analysis (QDA). Results In the Lanzhou cohort, SVM and Naïve Bayes classifiers effectively classified PVT cases from non-PVT cases, among the top features of which seven were shared: Portal Velocity (PV), Prothrombin Time (PT), Portal Vein Diameter (PVD), Prothrombin Time Activity (PTA), Activated Partial Thromboplastin Time (APTT), age and Child–Pugh score (CPS). The QDA model, trained based on the seven shared features on the Lanzhou cohort and validated on the Jilin cohort, demonstrated significant differentiation between PVT and non-PVT cases (AUROC = 0.73 and AUROC = 0.86, respectively). Subsequently, comparative analysis showed that our QDA model outperformed several other machine learning methods. Conclusion Our study presents a comprehensive data-driven model for PVT diagnosis in cirrhotic patients, enhancing clinical decision-making. The SVM–Naïve Bayes–QDA model offers a precise approach to managing PVT in this population.

Funder

National Natural Science Foundation of China

Shenzhen Science and Technology Program

Shenzhen Medical Research Fund

Clinical Research Center for General Surgery of Gansu Province

Publisher

Oxford University Press (OUP)

Subject

Molecular Biology,Information Systems

Reference54 articles.

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3. Portal vein thrombosis, mortality and hepatic decompensation in patients with cirrhosis: A meta-analysis;Stine;World J Hepatol,2015

4. Association between Portal Vein Thrombosis and risk of bleeding in liver cirrhosis: A systematic review of the literature;Xingshun;Clin Res Hepatol Gastroenterol,2015

5. Decreased portal vein velocity is predictive of the development of portal vein thrombosis: A matched case-control study[J];Stine;Liver Int,2018

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