Circulating clonally expanded T cells reflect functions of tumor-infiltrating T cells

Author:

Lucca Liliana E.1ORCID,Axisa Pierre-Paul1ORCID,Lu Benjamin12ORCID,Harnett Brian1,Jessel Shlomit2ORCID,Zhang Le1ORCID,Raddassi Khadir1ORCID,Zhang Lin2ORCID,Olino Kelly3ORCID,Clune James3ORCID,Singer Meromit45ORCID,Kluger Harriet M.2ORCID,Hafler David A.15ORCID

Affiliation:

1. Department of Neurology and Department of Immunobiology, Yale School of Medicine, New Haven, CT

2. Department of Medicine, Yale School of Medicine, New Haven, CT

3. Department of Surgery, Yale School of Medicine, New Haven, CT

4. Dana Farber Cancer Institute, Harvard Medical School, Boston, MA

5. Broad Institute of Massachusetts Institute of Technology and Harvard University, Cambridge, MA

Abstract

Understanding the relationship between tumor and peripheral immune environments could allow longitudinal immune monitoring in cancer. Here, we examined whether T cells that share the same TCRαβ and are found in both tumor and blood can be interrogated to gain insight into the ongoing tumor T cell response. Paired transcriptome and TCRαβ repertoire of circulating and tumor-infiltrating T cells were analyzed at the single-cell level from matched tumor and blood from patients with metastatic melanoma. We found that in circulating T cells matching clonally expanded tumor-infiltrating T cells (circulating TILs), gene signatures of effector functions, but not terminal exhaustion, reflect those observed in the tumor. In contrast, features of exhaustion are displayed predominantly by tumor-exclusive T cells. Finally, genes associated with a high degree of blood–tumor TCR sharing were overexpressed in tumor tissue after immunotherapy. These data demonstrate that circulating TILs have unique transcriptional patterns that may have utility for the interrogation of T cell function in cancer immunotherapy.

Funder

National Institutes of Health

Publisher

Rockefeller University Press

Subject

Immunology,Immunology and Allergy

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