Ectopic expression of HIV-1 Tat modifies gene expression in cultured B cells: implications for the development of B-cell lymphomas in HIV-1-infected patients

Author:

Valyaeva Anna A.123,Tikhomirova Maria A.14,Potashnikova Daria M.3ORCID,Bogomazova Alexandra N.56,Snigiryova Galina P.7,Penin Aleksey A.8,Logacheva Maria D.29,Arifulin Eugene A.2,Shmakova Anna A.410,Germini Diego10,Kachalova Anastasia I.3,Saidova Aleena A.311ORCID,Zharikova Anastasia A.12,Musinova Yana R.24,Mironov Andrey A.18,Vassetzky Yegor S.410ORCID,Sheval Eugene V.123ORCID

Affiliation:

1. School of Bioengineering and Bioinformatics, Lomonosov Moscow State University, Moscow, Russia

2. Belozersky Institute of Physico-Chemical Biology, Lomonosov Moscow State University, Moscow, Russia

3. Department of Cell Biology and Histology, School of Biology, Lomonosov Moscow State University, Moscow, Russia

4. Koltzov Institute of Developmental Biology, Moscow, Russia

5. Federal Research and Clinical Center of Physical-Chemical Medicine, Moscow, Russia

6. Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Federal Research and Clinical Center of Physical-Chemical Medicine of Federal Medical Biological Agency, Moscow, Russia

7. Burdenko National Medical Research Center of Neurosurgery, Moscow, Russia

8. Institute for Information Transmission Problems, Moscow, Russia

9. Skolkovo Institute of Science and Technology, Moscow, Russia

10. UMR9018 (CNRS – Institut Gustave Roussy – Université Paris Saclay), Centre National de Recherche Scientifique, Villejuif, France, France

11. Center for Precision Genome Editing and Genetic Technologies for Biomedicine, Engelhardt Institute of Molecular Biology, Moscow, Russia

Abstract

An increased frequency of B-cell lymphomas is observed in human immunodeficiency virus-1 (HIV-1)-infected patients, although HIV-1 does not infect B cells. Development of B-cell lymphomas may be potentially due to the action of the HIV-1 Tat protein, which is actively released from HIV-1-infected cells, on uninfected B cells. The exact mechanism of Tat-induced B-cell lymphomagenesis has not yet been precisely identified. Here, we ectopically expressed either Tat or its TatC22G mutant devoid of transactivation activity in the RPMI 8866 lymphoblastoid B cell line and performed a genome-wide analysis of host gene expression. Stable expression of both Tat and TatC22G led to substantial modifications of the host transcriptome, including pronounced changes in antiviral response and cell cycle pathways. We did not find any strong action of Tat on cell proliferation, but during prolonged culturing, Tat-expressing cells were displaced by non-expressing cells, indicating that Tat expression slightly inhibited cell growth. We also found an increased frequency of chromosome aberrations in cells expressing Tat. Thus, Tat can modify gene expression in cultured B cells, leading to subtle modifications in cellular growth and chromosome instability, which could promote lymphomagenesis over time.

Funder

Russian Science Foundation

Russian Foundation for Basic Research

Publisher

PeerJ

Subject

General Agricultural and Biological Sciences,General Biochemistry, Genetics and Molecular Biology,General Medicine,General Neuroscience

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