Genetic Architecture of Abdominal Aortic Aneurysm in the Million Veteran Program

Author:

Klarin Derek1234,Verma Shefali Setia5,Judy Renae67,Dikilitas Ozan8ORCID,Wolford Brooke N.9ORCID,Paranjpe Ishan10,Levin Michael G.11127ORCID,Pan Cuiping13ORCID,Tcheandjieu Catherine141516ORCID,Spin Joshua M.1415,Lynch Julie1718,Assimes Themistocles L.1415ORCID,Åldstedt Nyrønning Linn1920,Mattsson Erney1920,Edwards Todd L.2122,Denny Josh222324,Larson Eric232425,Lee Ming Ta Michael26,Carrell David2324,Zhang Yanfei26,Jarvik Gail P.27,Gharavi Ali G.28ORCID,Harley John293031ORCID,Mentch Frank32,Pacheco Jennifer A.33,Hakonarson Hakon3432,Skogholt Anne Heidi35,Thomas Laurent3536ORCID,Gabrielsen Maiken Elvestad35,Hveem Kristian35,Nielsen Jonas Bille3537ORCID,Zhou Wei33839,Fritsche Lars40ORCID,Huang Jie41,Natarajan Pradeep3424341ORCID,Sun Yan V.4445,DuVall Scott L.1846,Rader Daniel J.12ORCID,Cho Kelly41,Chang Kyong-Mi127,Wilson Peter W.F.4547ORCID,O’Donnell Christopher J.4148,Kathiresan Sekar49ORCID,Scali Salvatore T.12,Berceli Scott A.12,Willer Cristen95051,Jones Gregory T.52ORCID,Bown Matthew J.53,Nadkarni Girish10,Kullo Iftikhar J.8ORCID,Ritchie Marylyn5,Damrauer Scott M.67ORCID,Tsao Philip S.1415ORCID,Gaziano J. Michael,Ramoni Rachel,Beckham Jean,Breeling Jim,Chang Kyong-Mi,Huang Grant,Muralidhar Sumitra,O’Donnell Christopher J.,Casas Romero J.P.,Tsao Philip S.,Muralidhar Sumitra,Moser Jennifer,Whitbourne Stacey B.,Brewer Jessica V.,Concato John,Warren Stuart,Argyres Dean P.,Tsao Philip S.,Gaziano J. Michael,Stephens Brady,Brophy Mary T.,Humphries Donald E.,Do Nhan,Shayan Shahpoor,Nguyen Xuan-Mai T.,O’Donnell Christopher J.,Pyarajan Saiju,Tsao Philip S.,Cho Kelly,Pyarajan Saiju,Hauser Elizabeth,Sun Yan,Zhao Hongyu,Wilson Peter,McArdle Rachel,Dellitalia Louis,Harley John,Zablocki Clement J.,Whittle Jeffrey,Beckham Jean,Wells John,Gutierrez Salvador,Gibson Gretchen,Kaminsky Laurence,Villareal Gerardo,Kinlay Scott,Xu Junzhe,Hamner Mark,Haddock Kathlyn Sue,Bhushan Sujata,Iruvanti Pran,Godschalk Michael,Ballas Zuhair,Buford Malcolm,Mastorides Stephen,Klein Jon,Ratcliffe Nora,Florez Hermes,Swann Alan,Murdoch Maureen,Sriram Peruvemba,Yeh Shing Shing,Washburn Ronald,Jhala Darshana,Aguayo Samuel,Cohen David,Sharma Satish,Callaghan John,Oursler Kris Ann,Whooley Mary,Ahuja Sunil,Gutierrez Amparo,Schifman Ronald,Greco Jennifer,Rauchman Michael,Servatius Richard,Oehlert Mary,Wallbom Agnes,Fernando Ronald,Morgan Timothy,Stapley Todd,Sherman Scott,Anderson Gwenevere,Tsao Philip,Sonel Elif,Boyko Edward,Meyer Laurence,Gupta Samir,Fayad Joseph,Hung Adriana,Lichy Jack,Hurley Robin,Robey Brooks,Striker Robert

Affiliation:

1. Malcolm Randall VA Medical Center, Gainesville, FL (D.K., S.T.S., S.A.B.).

2. Division of Vascular Surgery and Endovascular Therapy, University of Florida College of Medicine, Gainesville (D.K., S.T.S., S.A.B.).

3. Center for Genomic Medicine (D.K., W.Z., P.N.), Massachusetts General Hospital, Harvard Medical School, Boston.

4. Program in Medical and Population Genetics (D.K.), Broad Institute of MIT and Harvard, Cambridge, MA.

5. Department of Genetics (S.S.V., M.R.), Perelman School of Medicine, University of Pennsylvania, Philadelphia.

6. Department of Surgery (R.J., S.M.D.), Perelman School of Medicine, University of Pennsylvania, Philadelphia.

7. Corporal Michael J. Crescenz VA Medical Center, Philadelphia, PA (R.J., M.G.L., K.-M.C., S.M.D.).

8. Department of Cardiovascular Medicine, Mayo Clinic, Rochester, MN (O.D., I.J.K.).

9. Department of Computational Medicine and Bioinformatics (B.N.W., C.W.), University of Michigan Medical School, Ann Arbor.

10. Department of Medicine, Icahn School of Medicine at Mount Sinai, New York, NY (I.P., G.N.).

11. Division of Cardiovascular Medicine (M.G.L.), Perelman School of Medicine, University of Pennsylvania, Philadelphia.

12. Department of Medicine (M.G.L., D.J.R., K.-M.C.), Perelman School of Medicine, University of Pennsylvania, Philadelphia.

13. Palo Alto Epidemiology Research and Information Center for Genomics (C.P.), CA.

14. VA Palo Alto Health Care System (C.T., J.M.S., T.L.A., P.S.T.), CA.

15. Division of Cardiovascular Medicine, Department of Medicine (C.T., J.M.S., T.L.A., P.S.T.), Stanford University School of Medicine, CA.

16. Department of Pediatric Cardiology (C.T.), Stanford University School of Medicine, CA.

17. Edith Nourse VA Medical Center, Bedford, MA (J.L.).

18. VA Informatics and Computing Infrastructure, VA Salt Lake City Health Care System, UT (J.L., S.L.D.).

19. Department of Vascular Surgery, St. Olavs Hospital, Trondheim, Norway (L.Å.N., E.M.).

20. Department of Circulation and Medical Imaging (L.Å.N., E.M.), Norwegian University of Science and Technology, Trondheim, Norway.

21. Division of Epidemiology, Department of Medicine, Vanderbilt-Ingram Cancer Center (T.L.E.), Vanderbilt University Medical Center, Nashville, TN.

22. Vanderbilt Genetics Institute (T.L.E., J.D.), Vanderbilt University Medical Center, Nashville, TN.

23. Department of Biomedical Informatics (J.D., E.L., D.C.), Vanderbilt University Medical Center, Nashville, TN.

24. Kaiser Permanente Washington Health Research Institute, Seattle (J.D., E.L., D.C.).

25. Departments of Medicine and Health Services (E.L.), University of Washington, Seattle.

26. Genomic Medicine Institute, Geisinger Health System, Danville, PA (M.T.M.L., Y.Z.).

27. Division of Medical Genetics, Departments of Medicine and Genome Sciences (G.P.J.), University of Washington, Seattle.

28. Division of Nephrology and Center for Precision Medicine and Genomics, Columbia University, New York, NY (A.G.G.).

29. Center for Autoimmune Genomics and Etiology (CAGE), Cincinnati Children’s Hospital Medical Center, OH (J.H.).

30. Department of Pediatrics, University of Cincinnati College of Medicine, OH (J.H.).

31. US Department of Veterans Affairs, Cincinnati, OH (J.H.).

32. Center for Applied Genomics, The Children’s Hospital of Philadelphia, PA (F.M., H.H.).

33. Center for Genetic Medicine, Northwestern University Feinberg School of Medicine, Chicago, IL (J.A.P.).

34. Department of Pediatrics (H.H.), Perelman School of Medicine, University of Pennsylvania, Philadelphia.

35. Faculty of Medicine and Health Sciences (A.H.S., L.T., M.E.G., K.H., J.B.N.), Norwegian University of Science and Technology, Trondheim, Norway.

36. Department of Clinical and Molecular Medicine (L.T.), Norwegian University of Science and Technology, Trondheim, Norway.

37. K.G. Jebsen Center for Genetic Epidemiology, Department of Public Health and Nursing, Department of Epidemiology Research, Statens Serum Institute, Copenhagen, Denmark (J.B.N.).

38. Stanley Center for Psychiatric Research (W.Z.), Broad Institute of MIT and Harvard, Cambridge, MA.

39. Analytic and Translational Genetics Unit (W.Z.), Massachusetts General Hospital, Boston.

40. Department of Biostatistics (L.F.), University of Michigan Medical School, Ann Arbor.

41. Boston VA Healthcare System, MA (J.H., P.N., K.C., C.J.O.).

42. Department of Medicine (P.N.), Massachusetts General Hospital, Harvard Medical School, Boston.

43. Cardiovascular Research Center (P.N.), Massachusetts General Hospital, Boston.

44. Department of Epidemiology, Emory University Rollins School of Public Health, Atlanta, GA (Y.V.S.).

45. Atlanta VA Health Care System, Decatur, GA (Y.V.S., P.W.F.W.).

46. Division of Epidemiology, Department of Internal Medicine, University of Utah School of Medicine, Salt Lake City (S.L.D.).

47. Emory Clinical Cardiovascular Research Institute, Atlanta, GA (P.W.F.W.).

48. Cardiovascular Medicine Division, Department of Medicine, Brigham and Women’s Hospital, Harvard Medical School, Boston, MA (C.J.O.).

49. Verve Therapeutics, Cambridge, MA (S.K.).

50. Department of Internal Medicine, Division of Cardiology (C.W.), University of Michigan Medical School, Ann Arbor.

51. Department of Human Genetics (C.W.), University of Michigan Medical School, Ann Arbor.

52. Department of Surgical Sciences, Dunedin School of Medicine, University of Otago, New Zealand (G.T.J.).

53. Department of Cardiovascular Sciences and NIHR Leicester Biomedical Research Centre, University of Leicester, United Kingdom (M.J.B.).

Abstract

Background: Abdominal aortic aneurysm (AAA) is an important cause of cardiovascular mortality; however, its genetic determinants remain incompletely defined. In total, 10 previously identified risk loci explain a small fraction of AAA heritability. Methods: We performed a genome-wide association study in the Million Veteran Program testing ≈18 million DNA sequence variants with AAA (7642 cases and 172 172 controls) in veterans of European ancestry with independent replication in up to 4972 cases and 99 858 controls. We then used mendelian randomization to examine the causal effects of blood pressure on AAA. We examined the association of AAA risk variants with aneurysms in the lower extremity, cerebral, and iliac arterial beds, and derived a genome-wide polygenic risk score (PRS) to identify a subset of the population at greater risk for disease. Results: Through a genome-wide association study, we identified 14 novel loci, bringing the total number of known significant AAA loci to 24. In our mendelian randomization analysis, we demonstrate that a genetic increase of 10 mm Hg in diastolic blood pressure (odds ratio, 1.43 [95% CI, 1.24–1.66]; P =1.6×10 −6 ), as opposed to systolic blood pressure (odds ratio, 1.06 [95% CI, 0.97–1.15]; P =0.2), likely has a causal relationship with AAA development. We observed that 19 of 24 AAA risk variants associate with aneurysms in at least 1 other vascular territory. A 29-variant PRS was strongly associated with AAA (odds ratio PRS , 1.26 [95% CI, 1.18–1.36]; P PRS =2.7×10 −11 per SD increase in PRS), independent of family history and smoking risk factors (odds ratio PRS+family history+smoking , 1.24 [95% CI, 1.14–1.35]; P PRS =1.27×10 −6 ). Using this PRS, we identified a subset of the population with AAA prevalence greater than that observed in screening trials informing current guidelines. Conclusions: We identify novel AAA genetic associations with therapeutic implications and identify a subset of the population at significantly increased genetic risk of AAA independent of family history. Our data suggest that extending current screening guidelines to include testing to identify those with high polygenic AAA risk, once the cost of genotyping becomes comparable with that of screening ultrasound, would significantly increase the yield of current screening at reasonable cost.

Publisher

Ovid Technologies (Wolters Kluwer Health)

Subject

Physiology (medical),Cardiology and Cardiovascular Medicine

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