Comparative Circulation Dynamics of the Five Main HIV Types in China

Author:

Vrancken Bram1ORCID,Zhao Bin2,Li Xingguang3,Han Xiaoxu2,Liu Haizhou4,Zhao Jin5,Zhong Ping6,Lin Yi6,Zai Junjie7,Liu Mingchen2,Smith Davey M.8,Dellicour Simon19,Chaillon Antoine8ORCID

Affiliation:

1. Department of Microbiology, Immunology and Transplantation, Rega Institute, Laboratory for Computational and Evolutionary Virology, KU Leuven, Leuven, Belgium

2. NHC Key Laboratory of AIDS Immunology (China Medical University), National Clinical Research Center for Laboratory Medicine, The First Affiliated Hospital of China Medical University, Shenyang, China

3. Department of Hospital Office, The First People’s Hospital of Fangchenggang, Fangchenggang, China

4. Centre for Emerging Infectious Diseases, The State Key Laboratory of Virology, Wuhan Institute of Virology, University of Chinese Academy of Sciences, Wuhan, China

5. Shenzhen Center for Disease Control and Prevention, Shenzhen, China

6. Department of AIDS and STD, Shanghai Municipal Center for Disease Control and Prevention; Shanghai Municipal Institutes for Preventive Medicine, Shanghai, China

7. Immunology innovation Team, School of Medicine, Ningbo University, Ningbo, Zhejiang China

8. Division of Infectious Diseases and Global Public Health, University of California San Diego, California, USA

9. Spatial Epidemiology Lab (SpELL), Université Libre de Bruxelles, Brussels, Belgium

Abstract

While traditional epidemiological studies are of great interest in describing the dynamics of epidemics, they struggle to fully capture the geospatial dynamics and factors driving the dispersal of pathogens like HIV as they have difficulties capturing linkages between infections. To overcome this, we used a discrete phylogeographic approach coupled to a generalized linear model extension to characterize the dynamics and drivers of the across-province spread of the five main HIV types circulating in China. Our results indicate that large urbanized areas with dense populations and developed transportation infrastructures are facilitators of HIV dispersal throughout China and highlight the need to consider harmonized country-wide public policies to control local HIV epidemics.

Funder

National Science Research for the 13th Five-Year Plan

Scientific Research Funding Project of Liaoning Province Education

Fonds voor Wetenschappelijk Onderzoek

Division of Intramural Research, National Institute of Allergy and Infectious Diseases

Fonds De La Recherche Scientifique - FNRS

Central Public-interest Scientific Institution Basal Research Fund for Chinese Academy of Tropical Agricultural Sciences

UC | UCSD | Center for AIDS Research, University of California, San Diego

Publisher

American Society for Microbiology

Subject

Virology,Insect Science,Immunology,Microbiology

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