Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing-Reference-Cited by-同舟云学术

Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing

Published:2018-11-15 Issue:19 Volume:7 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Bouchez Valérie¹²,Baines Sarah Louise³,Guillot Sophie¹²,Brisse Sylvain¹²

Affiliation:

1. Biodiversity and Epidemiology of Bacterial Pathogens Unit, Institut Pasteur, Paris, France

2. National Reference Center for Whooping Cough and Other Bordetella Infections, Institut Pasteur, Paris, France

3. Department of Microbiology and Immunology, The University of Melbourne at the Peter Doherty Institute for Infection and Immunity, Melbourne, Australia

Abstract

Here, we describe the complete genome sequences of two Bordetella pertussis strains, FR5810, a clinical isolate recovered from the respiratory tract of an infant, and Tohama, a key reference strain for the species. Sequences were obtained using a hybrid approach combining Oxford Nanopore Technologies MinION and Illumina NextSeq 500 sequence data.

Funder

Australian Government

Victorian State Government

French Government

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/MRA.01207-18

Reference7 articles.

1. Genomic Sequencing of Bordetella pertussis for Epidemiology and Global Surveillance of Whooping Cough