Reduced Independence in Daily Living Is Associated with the Gut Microbiome in People with HIV and HCV

Author:

Taylor Bryn C.1ORCID,Weldon Kelly C.23,Ellis Ronald J.45,Franklin Donald6,McDonald Daniel7,Humphrey Gregory7,Bryant MacKenzie7,Toronczak Julia7,Schwartz Tara7,Iudicello Jennifer6,Heaton Robert6,Grant Igor6,Gianella Sara8ORCID,Letendre Scott910,Swafford Austin3,Dorrestein Pieter C.237,Knight Rob371112ORCID

Affiliation:

1. Biomedical Sciences Graduate Program, University of California San Diego, La Jolla, California, USA

2. Collaborative Mass Spectrometry Innovation Center, Skaggs School of Pharmacy and Pharmaceutical Sciences, University of California San Diego, La Jolla, California, USA

3. Center for Microbiome Innovation, University of California San Diego, La Jolla, California, USA

4. Department of Neurosciences, HIV Neurobehavioral Research Center, University of California San Diego, La Jolla, California, USA

5. Department of Psychiatry, HIV Neurobehavioral Research Center, University of California San Diego, La Jolla, California, USA

6. Department of Psychiatry, School of Medicine, University of California San Diego, La Jolla, California, USA

7. Department of Pediatrics, School of Medicine, University of California San Diego, La Jolla, California, USA

8. Division of Infectious Diseases and Global Public Health, University of California San Diego, La Jolla, California, USA

9. Department of Medicine, University of California San Diego, La Jolla, California, USA

10. Department of Psychiatry, University of California San Diego, La Jolla, California, USA

11. Department of Computer Science and Engineering, University of California San Diego, La Jolla, California, USA

12. Department of Bioengineering, University of California San Diego, La Jolla, California, USA

Abstract

The microbes in the gut and the chemicals they produce by metabolism have been linked to brain function. In earlier work, we showed that infection with two viruses, HIV and HCV, changed the gut microbes and metabolism in ways that were associated with a lifetime history of major depressive disorder. Here, we extend this analysis looking at a measurement of independence in daily living. We find that in individuals with HIV, whether or not they also have HCV, those who reported reduced independence were enriched in a genus of bacteria called Bacteroides . This result is interesting because Bacteroides is strongly associated with diets low in carbohydrates and high in animal protein, suggesting that diet changes may help preserve independent living in people living long-term with HIV (although clinical intervention trials would be needed in order to confirm this).

Publisher

American Society for Microbiology

Subject

Computer Science Applications,Genetics,Molecular Biology,Modelling and Simulation,Ecology, Evolution, Behavior and Systematics,Biochemistry,Physiology,Microbiology

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