Complete genome of <i>Flavobacterium pectinovorum</i> str. ZE23VCel01 obtained through Nanopore Q20+ chemistry-Reference-Cited by-同舟云学术

Complete genome of Flavobacterium pectinovorum str. ZE23VCel01 obtained through Nanopore Q20+ chemistry

Published:2024-01-17 Issue:1 Volume:13 Page:
ISSN:2576-098X
Container-title:Microbiology Resource Announcements
language:en
Short-container-title:Microbiol Resour Announc

Author:

Serra Moncadas Lucas¹,Schnellmann Vanessa²,Hofer Cyrill¹,Rain-Franco Angel³^ORCID,Andrei Adrian-Stefan²^ORCID

Affiliation:

1. Microbial Evogenomics Lab, Limnological Station, Department of Plant and Microbial Biology, University of Zurich , Kilchberg, Switzerland

2. Faculty of Sciences, University of Zurich , Zurich, Switzerland

3. Limnological Station, Department of Plant and Microbial Biology, University of Zurich , Kilchberg, Switzerland

Abstract

ABSTRACT This study reports the complete genome of Flavobacterium pectinovorum str. ZE23VCel01 isolated from a freshwater environment. By means of Nanopore Q20+ chemistry, the chromosome was assembled as a circular element with a length of 5.9 Mbp, a GC content of 33.58%, and a coverage of 122×.

Funder

Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung

Publisher

American Society for Microbiology

Subject

Genetics,Immunology and Microbiology (miscellaneous),Molecular Biology

Link

https://journals.asm.org/doi/pdf/10.1128/mra.00715-23

Reference12 articles.

1. Emerging flavobacterial infections in fish: A review

2. Stochasticity causes high β‐diversity and functional divergence of bacterial assemblages in closed systems

3. Cryopreservation and Resuscitation of Natural Aquatic Prokaryotic Communities

4. NanoPack2: population-scale evaluation of long-read sequencing data

5. metaFlye: scalable long-read metagenome assembly using repeat graphs