Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions-Reference-Cited by-同舟云学术

Model-based clustering of DNA methylation array data: a recursive-partitioning algorithm for high-dimensional data arising as a mixture of beta distributions

Published:2008-09-09 Issue:1 Volume:9 Page:
ISSN:1471-2105
Container-title:BMC Bioinformatics
language:en
Short-container-title:BMC Bioinformatics

Author:

Houseman E Andres,Christensen Brock C,Yeh Ru-Fang,Marsit Carmen J,Karagas Margaret R,Wrensch Margaret,Nelson Heather H,Wiemels Joseph,Zheng Shichun,Wiencke John K,Kelsey Karl T

Publisher

Springer Science and Business Media LLC

Subject

Applied Mathematics,Computer Science Applications,Molecular Biology,Biochemistry,Structural Biology

Link

http://link.springer.com/content/pdf/10.1186/1471-2105-9-365.pdf

Reference28 articles.

1. Russo V, Martienssen RA, Riggs AD: Epigenetic mechanisms of gene regulation. Cold Spring Harbor Laboratory Press; 1996.

2. Knudson AG: Chasing the cancer demon. Annu Rev Genet 2000, 34: 1–19. 10.1146/annurev.genet.34.1.1

3. Jones PA, Baylin SB: The fundamental role of epigenetic events in cancer. Nat Rev Genet 2002, 3: 415–428. 10.1038/nrg962

4. Sakamoto H, Suzuki M, Abe T, Hosoyama T, Himeno E, Tanaka S, Greally JM, Hattori N, Yagi S, Shiota K: Cell type-specific methylation profiles occurring disproportionately in CpG-less regions that delineate developmental similarity. Genes Cells 2007, 12: 1123–1132. 10.1111/j.1365-2443.2007.01120.x

5. Eckhardt F, Lewin J, Cortese R, Rakyan VK, Attwood J, Burger M, Burton J, Cox TV, Davies R, Down TA, et al.: DNA methylation profiling of human chromosomes 6, 20 and 22. Nat Genet 2006, 38: 1378–1385. 10.1038/ng1909

Cited by 166 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Methods in DNA methylation array dataset analysis: A review;Computational and Structural Biotechnology Journal;2024-12

2. Computational deconvolution of DNA methylation data from mixed DNA samples;Briefings in Bioinformatics;2024-03-27

3. Discovery of novel DNA methylation biomarker panels for the diagnosis and differentiation between common adenocarcinomas and their liver metastases;Scientific Reports;2024-02-07

4. Artificial intelligence and deep learning in molecular testing;Diagnostic Molecular Pathology;2024

5. In Silico Gene Prioritization Highlights the Significance of Bone Morphogenetic Protein 4 (BMP4) Promoter Methylation across All Methylation Clusters in Colorectal Cancer;International Journal of Molecular Sciences;2023-08-11