ChIP–seq and beyond: new and improved methodologies to detect and characterize protein–DNA interactions
Author:
Publisher
Springer Science and Business Media LLC
Subject
Genetics (clinical),Genetics,Molecular Biology
Link
http://www.nature.com/articles/nrg3306.pdf
Reference111 articles.
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2. Valouev, A. et al. Genome-wide analysis of transcription factor binding sites based on ChIP-Seq data. Nature Methods 5, 829–834 (2008).
3. Kharchenko, P. V., Tolstorukov, M. Y. & Park, P. J. Design and analysis of ChIP-seq experiments for DNA-binding proteins. Nature Biotechnol. 26, 1351–1359 (2008).
4. Boyle, A. P. et al. High-resolution mapping and characterization of open chromatin across the genome. Cell. 132, 311–322 (2008).
5. Song, L. & Crawford, G. E. DNase-seq: a high-resolution technique for mapping active gene regulatory elements across the genome from mammalian cells. Cold Spring Harb. Protoc. 2010, pdb.prot5384 (2010).
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