A Comparison of mRNA Sequencing with Random Primed and 3′-Directed Libraries-Reference-Cited by-同舟云学术

A Comparison of mRNA Sequencing with Random Primed and 3′-Directed Libraries

Published:2017-11-07 Issue:1 Volume:7 Page:
ISSN:2045-2322
Container-title:Scientific Reports
language:en
Short-container-title:Sci Rep

Author:

Xiong Yuguang^ORCID,Soumillon Magali,Wu Jie,Hansen Jens,Hu Bin,van Hasselt Johan G. C.^ORCID,Jayaraman Gomathi,Lim Ryan,Bouhaddou Mehdi,Ornelas Loren,Bochicchio Jim,Lenaeus Lindsay,Stocksdale Jennifer,Shim Jaehee,Gomez Emilda,Sareen Dhruv^ORCID,Svendsen Clive,Thompson Leslie M.,Mahajan Milind,Iyengar Ravi,Sobie Eric A.,Azeloglu Evren U.^ORCID,Birtwistle Marc R.

Publisher

Springer Science and Business Media LLC

Subject

Multidisciplinary

Link

http://www.nature.com/articles/s41598-017-14892-x.pdf

Reference33 articles.

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2. Trapnell, C. et al. Transcript assembly and quantification by RNA-Seq reveals unannotated transcripts and isoform switching during cell differentiation. Nat. Biotechnol. 28, 511–515 (2010).

3. Trapnell, C., Pachter, L. & Salzberg, S. L. TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics 25, 1105–1111 (2009).

4. Li, S. et al. Detecting and correcting systematic variation in large-scale RNA sequencing data. Nat. Biotechnol. 32, 888–895 (2014).

5. Conesa, A. et al. A survey of best practices for RNA-seq data analysis. Genome Biol. 17, 13 (2016).

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