SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity-Reference-Cited by-同舟云学术

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SARS-CoV-2 Delta Variant Decreases Nanobody Binding and ACE2 Blocking Effectivity

Published:2022-05-09 Issue:10 Volume:62 Page:2490-2498
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Golcuk Mert¹^ORCID,Hacisuleyman Aysima²^ORCID,Yilmaz Sema Zeynep¹^ORCID,Taka Elhan¹^ORCID,Yildiz Ahmet³⁴^ORCID,Gur Mert¹^ORCID

Affiliation:

1. Department of Mechanical Engineering, Istanbul Technical University (ITU), 34437 Istanbul, Turkey

2. Institute of Bioengineering, Swiss Federal Institute of Technology (EPFL), 1015 Lausanne, Switzerland

3. Physics Department, University of California, Berkeley, California 94720, United States

4. Department of Molecular and Cellular Biology, University of California, Berkeley, California 94720, United States

Funder

COVID-19 HPC Consortium

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c01523

Reference51 articles.

1. Nanobody: The “Magic Bullet” for Molecular Imaging?

2. An alpaca nanobody neutralizes SARS-CoV-2 by blocking receptor interaction

3. NeutrobodyPlex—monitoring SARS‐CoV‐2 neutralizing immune responses using nanobodies

4. Nanobodies: Natural Single-Domain Antibodies

5. Nanobodies from camelid mice and llamas neutralize SARS-CoV-2 variants

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1. Interaction analysis of SARS-CoV-2 omicron BA1 and BA2 of RBD with fifty monoclonal antibodies: Molecular dynamics approach;Journal of Molecular Graphics and Modelling;2024-05

2. GōMartini 3: From large conformational changes in proteins to environmental bias corrections;2024-04-16

3. Binding of synthetic nanobodies to the SARS-CoV-2 receptor-binding domain: the importance of salt bridges;Physical Chemistry Chemical Physics;2023

4. Omicron BA.1 and BA.2 variants increase the interactions of SARS-CoV-2 spike glycoprotein with ACE2;Journal of Molecular Graphics and Modelling;2022-12

5. Electrostatic Features for the Receptor Binding Domain of SARS-COV-2 Wildtype and Its Variants. Compass to the Severity of the Future Variants with the Charge-Rule;The Journal of Physical Chemistry B;2022-09-06

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