C-Graphs Tool with Graphical User Interface to Dissect Conserved Hydrogen-Bond Networks: Applications to Visual Rhodopsins-Reference-Cited by-同舟云学术

C-Graphs Tool with Graphical User Interface to Dissect Conserved Hydrogen-Bond Networks: Applications to Visual Rhodopsins

Published:2021-10-20 Issue:11 Volume:61 Page:5692-5707
ISSN:1549-9596
Container-title:Journal of Chemical Information and Modeling
language:en
Short-container-title:J. Chem. Inf. Model.

Author:

Bertalan Éva¹,Lesca Elena²³,Schertler Gebhard F. X.²³,Bondar Ana-Nicoleta¹⁴⁵^ORCID

Affiliation:

1. Theoretical Molecular Biophysics, Department of Physics, Freie Universität Berlin, Arnimallee 14, D-14195 Berlin, Germany

2. Laboratory of Biomolecular Research, Department of Biology and Chemistry, Paul Scherrer Institut, ETH Zürich, 5303 Villigen-PSI, Switzerland

3. Department of Biology, ETH Zürich, 8093 Zürich, Switzerland

4. Faculty of Physics, University of Bucharest, Strada Atomiştilor Nr. 405, Măgurele 077125, Romania

5. Computational Biomedicine, IAS-5/INM-9, Institute for Neuroscience and Medicine and Institute for Advanced Simulations, Forschungszentrum Jülich, 52425 Jülich, Germany

Funder

Deutsche Forschungsgemeinschaft

Publisher

American Chemical Society (ACS)

Subject

Library and Information Sciences,Computer Science Applications,General Chemical Engineering,General Chemistry

Link

https://pubs.acs.org/doi/pdf/10.1021/acs.jcim.1c00827

Reference81 articles.

1. Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins

2. Hydrogen bond dynamics in membrane protein function

3. The Molecular Basis of G Protein–Coupled Receptor Activation

4. Energy Landscapes as a Tool to Integrate GPCR Structure, Dynamics, and Function

5. Modulation of rhodopsin function by properties of the membrane bilayer

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