Communicating Mass Spectrometry Quality Information in mzQC with Python, R, and Java-Reference-Cited by-同舟云学术

Communicating Mass Spectrometry Quality Information in mzQC with Python, R, and Java

Published:2024-06-26 Issue:8 Volume:35 Page:1875-1882
ISSN:1044-0305
Container-title:Journal of the American Society for Mass Spectrometry
language:en
Short-container-title:J. Am. Soc. Mass Spectrom.

Author:

Bielow Chris¹^ORCID,Hoffmann Nils²^ORCID,Jimenez-Morales David³,Van Den Bossche Tim⁴⁵^ORCID,Vizcaíno Juan Antonio⁶^ORCID,Tabb David L.⁷^ORCID,Bittremieux Wout⁸^ORCID,Walzer Mathias⁶^ORCID

Affiliation:

1. Bioinformatics Solution Center, Institut für Mathematik und Informatik, Freie Universität Berlin, Takustrasse 9, 14195 Berlin, Germany

2. Institute for Bio- and Geosciences (IBG-5), Forschungszentrum Jülich GmbH, 52428 Jülich, Germany

3. Department of Medicine, Stanford University School of Medicine, Stanford, California 94305, United States

4. Department of Biomolecular Medicine, Faculty of Medicine and Health Sciences, Ghent University, Technologiepark-Zwijnaarde 75, 9052 Ghent, Belgium

5. VIB-UGent Center for Medical Biotechnology, VIB, Technologiepark-Zwijnaarde 75, 9052 Ghent, Belgium

6. European Molecular Biology Laboratory, EMBL-European Bioinformatics Institute (EMBL-EBI), Hinxton, Cambridge CB10 1SD, United Kingdom

7. European Research Institute for the Biology of Ageing, University Medical Center Groningen, Groningen 9713 AV, The Netherlands

8. Department of Computer Science, University of Antwerp, Antwerpen 2020, Belgium

Funder

Universiteit Antwerpen

German Network for Bioinformatics Infrastructure

Wellcome Trust

Fonds Wetenschappelijk Onderzoek

European Bioinformatics Institute

Horizon 2020 Framework Programme

Biotechnology and Biological Sciences Research Council

Publisher

American Chemical Society (ACS)

Link

https://pubs.acs.org/doi/pdf/10.1021/jasms.4c00174

Reference39 articles.

1. Quality control in mass spectrometry-based proteomics

2. 1,500 scientists lift the lid on reproducibility

3. Recommendations from the 2008 International Summit on Proteomics Data Release and Sharing Policy: The Amsterdam Principles

4. Recommendations for Mass Spectrometry Data Quality Metrics for Open Access Data (Corollary to the Amsterdam Principles)

5. Performance Metrics for Liquid Chromatography-Tandem Mass Spectrometry Systems in Proteomics Analyses