Toward Full-Stack In Silico Synthetic Biology: Integrating Model Specification, Simulation, Verification, and Biological Compilation-Reference-Cited by-同舟云学术

Toward Full-Stack In Silico Synthetic Biology: Integrating Model Specification, Simulation, Verification, and Biological Compilation

Published:2021-08-02 Issue:8 Volume:10 Page:1931-1945
ISSN:2161-5063
Container-title:ACS Synthetic Biology
language:en
Short-container-title:ACS Synth. Biol.

Author:

Konur Savas¹^ORCID,Mierla Laurentiu¹,Fellermann Harold²^ORCID,Ladroue Christophe³,Brown Bradley²,Wipat Anil²^ORCID,Twycross Jamie⁴,Dun Boyang Peter⁵,Kalvala Sara³,Gheorghe Marian¹,Krasnogor Natalio²^ORCID

Affiliation:

1. Department of Computer Science, University of Bradford, Bradford, BD7 1DP, U.K.

2. Interdisciplinary Computing and Complex Biosystems Research Group, Newcastle University, Newcastle, NE1 7RU, U.K.

3. Department of Computer Science, University of Warwick, Coventry, CV4 7AL, U.K.

4. School of Computer Science, University of Nottingham, Nottingham, NG8 1BB, U.K.

5. Department of Computer Science, Stanford University, Stanford, California 94305, United States

Funder

Engineering and Physical Sciences Research Council

Royal Academy of Engineering

Publisher

American Chemical Society (ACS)

Subject

Biochemistry, Genetics and Molecular Biology (miscellaneous),Biomedical Engineering,General Medicine

Link

https://pubs.acs.org/doi/pdf/10.1021/acssynbio.1c00143

Reference80 articles.

1. Next generation gene synthesis: From microarrays to genomes

2. Development and Applications of CRISPR-Cas9 for Genome Engineering

3. CRISPR-Cas9 In Situ engineering of subtilisin E in Bacillus subtilis

4. Synthetic biology for bio-derived structural materials

5. Synthetic biology engineering of biofilms as nanomaterials factories

Cited by 16 articles. 订阅此论文施引文献订阅此论文施引文献，注册后可以免费订阅5篇论文的施引文献，订阅后可以查看论文全部施引文献

1. Scaling-up Engineering Biology for Enhanced Environmental Solutions;ACS Synthetic Biology;2024-06-21

2. Technologies for design-build-test-learn automation and computational modelling across the synthetic biology workflow: a review;Network Modeling Analysis in Health Informatics and Bioinformatics;2024-05-03

3. Biology System Description Language (BiSDL): a modeling language for the design of multicellular synthetic biological systems;BMC Bioinformatics;2024-04-25

4. Biology System Description Language (BiSDL): a modeling language for the design of multicellular synthetic biological systems;2024-01-14

5. BioNexusSentinel: a visual tool for bioregulatory network and cytohistological RNA-seq genetic expression profiling within the context of multicellular simulation research using ChatGPT-augmented software engineering;Bioinformatics Advances;2024-01-01