SNP-mediated binding of TBX1 to the enhancer element of IL-10 reduces the risk of Behçet’s disease

Author:

Tan Handan1,Su Guannan1,Tan Xiao1,Qin Yang1,Chen Lin1,Yuan Gangxiang1,Kijlstra Aize2,Yang Peizeng1ORCID

Affiliation:

1. The First Affiliated Hospital of Chongqing Medical University, Chongqing Key Lab of Ophthalmology, Chongqing Eye Institute, Chongqing Branch of National Clinical Research Center for Ocular Diseases, Chongqing, PR China

2. University Eye Clinic Maastricht, Maastricht, Limburg, The Netherlands

Abstract

Aims: The genetic association between Behçet’s disease susceptibility and IL-10 has been confirmed in multiple cohorts, but the underlying mechanism of this association remains unclear. Materials & methods: We combined public resources and laboratory experiments (electrophoretic mobility shift assays, chromatin immunoprecipitation, luciferase reporter gene and CRISPR/Cas9 genome editing) to analyze transcription factor binding and enhancer activity controlling IL-10 expression. Results & conclusion: The T allele of noncoding rs3024490 within super-enhancer elements is able to specifically bind TBX1 and, in turn, promotes the enhancer activity and increased expression of IL-10. However, a relative deficiency in TBX1 in Behçet’s disease patients leads to the low expression of IL-10 and increased risk of developing Behçet’s disease.

Funder

Chongqing Outstanding Scientists Project

Natural Science Foundation Major International (Regional) Joint Research Project

National Natural Science Foundation Key Program

Chongqing Science & Technology Platform and Base Construction Program

Chongqing Key Laboratory of Ophthalmology

Chongqing Chief Medical Scientist Project

Publisher

Future Medicine Ltd

Subject

Cancer Research,Genetics

Cited by 1 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

1. Genetics in Behcet’s Disease: An Update Review;Frontiers in Ophthalmology;2022-06-03

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