Estimation of Serial Interval and Reproduction Number to Quantify the Transmissibility of SARS-CoV-2 Omicron Variant in South Korea

Author:

Kim Dasom1ORCID,Ali Sheikh Taslim23ORCID,Kim Sungchan4ORCID,Jo Jisoo15,Lim Jun-Sik6,Lee Sunmi4ORCID,Ryu Sukhyun1ORCID

Affiliation:

1. Department of Preventive Medicine, Konyang University College of Medicine, Daejeon 35365, Korea

2. World Health Organization Collaborating Centre for Infectious Disease Epidemiology and Control, School of Public Health, Li Ka Shing Faculty of Medicine, University of Hong Kong, Hong Kong, China

3. Laboratory of Data Discovery for Health Limited (D24H), Hong Kong Science Park, New Territories, Hong Kong, China

4. Department of Applied Mathematics, Kyung Hee University, Yongin 17104, Korea

5. Department of Nursing, Konyang University, Daejeon 35365, Korea

6. IHAP, Université de Toulouse, INRAE, ENVT, 31300 Toulouse, France

Abstract

The omicron variant (B.1.1.529) of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) was the predominant variant in South Korea from late January 2022. In this study, we aimed to report the early estimates of the serial interval distribution and reproduction number to quantify the transmissibility of the omicron variant in South Korea between 25 November 2021 and 31 December 2021. We analyzed 427 local omicron cases and reconstructed 73 transmission pairs. We used a maximum likelihood estimation to assess serial interval distribution from transmission pair data and reproduction numbers from 74 local cases in the first local outbreak. We estimated that the mean serial interval was 3.78 (standard deviation, 0.76) days, which was significantly shorter in child infectors (3.0 days) compared to adult infectors (5.0 days) (p < 0.01). We estimated the mean reproduction number was 1.72 (95% CrI, 1.60–1.85) for the omicron variant during the first local outbreak. Strict adherence to public health measures, particularly in children, should be in place to reduce the transmission risk of the highly transmissible omicron variant in the community.

Funder

National Research Foundation of Korea

Publisher

MDPI AG

Reference30 articles.

1. Kim, A. (2022, March 01). Omicron dominant in South Korea. The Korea Herald. Available online: http://www.koreaherald.com/view.php?ud=20220124000957.

2. SARS-CoV-2 Omicron variant: Antibody evasion and cryo-EM structure of spike protein-ACE2 complex;Mannar;Science,2022

3. Outbreak caused by the SARS-CoV-2 Omicron variant in Norway, November to December 2021;Brandal;Eurosurveillance,2021

4. Investigation of a SARS-CoV-2 B.1.1.529 (Omicron) Variant Cluster—Nebraska, November-December 2021;Jansen;Morb. Mortal. Wkly. Rep.,2021

5. Korea Centers for Disease Control and Prevention Agency (2022, January 26). A Total of 5 Confirmed Cases of Omicron Mutated Virus in Korea Urgent Implementation of Additional Measures to Block Inflow and Prevent Spread, Available online: https://nih.go.kr/board/board.es?mid=a40303010000&bid=0015&act=view&list_no=717719.

Cited by 73 articles. 订阅此论文施引文献 订阅此论文施引文献,注册后可以免费订阅5篇论文的施引文献,订阅后可以查看论文全部施引文献

同舟云学术

1.学者识别学者识别

2.学术分析学术分析

3.人才评估人才评估

"同舟云学术"是以全球学者为主线,采集、加工和组织学术论文而形成的新型学术文献查询和分析系统,可以对全球学者进行文献检索和人才价值评估。用户可以通过关注某些学科领域的顶尖人物而持续追踪该领域的学科进展和研究前沿。经过近期的数据扩容,当前同舟云学术共收录了国内外主流学术期刊6万余种,收集的期刊论文及会议论文总量共计约1.7亿篇,并以每天添加12000余篇中外论文的速度递增。我们也可以为用户提供个性化、定制化的学者数据。欢迎来电咨询!咨询电话:010-8811{复制后删除}0370

www.globalauthorid.com

TOP

Copyright © 2019-2025 北京同舟云网络信息技术有限公司
京公网安备11010802033243号  京ICP备18003416号-3