Urea Decomposition Mechanism by Dinuclear Nickel Complexes

Author:

Martins Christian O.12ORCID,Sebastiany Leticia K.1,Lopez-Castillo Alejandro1ORCID,Freitas Rafael S.3ORCID,Andrade Leandro H.4ORCID,Toma Henrique E.4ORCID,Netto Caterina G. C. Marques1ORCID

Affiliation:

1. Department of Chemistry, Universidade Federal de Sao Carlos, Rod. Washington Luiz, s/n, km 235, Sao Carlos 13565-905, Brazil

2. Department of Chemical Engineering, Universidade Federal de Sao Carlos, Rod. Washington Luiz, s/n, km 235, Sao Carlos 13565-905, Brazil

3. Institute of Physics, Universidade de Sao Paulo, Rua do Matao, 1371, Sao Paulo 05508-220, Brazil

4. Institute of Chemistry, Universidade de Sao Paulo, Av. Prof. Lineu Prestes 748, Sao Paulo 05508-900, Brazil

Abstract

Urease is an enzyme containing a dinuclear nickel active center responsible for the hydrolysis of urea into carbon dioxide and ammonia. Interestingly, inorganic models of urease are unable to mimic its mechanism despite their similarities to the enzyme active site. The reason behind the discrepancy in urea decomposition mechanisms between inorganic models and urease is still unknown. To evaluate this factor, we synthesized two bis-nickel complexes, [Ni2L(OAc)] (1) and [Ni2L(Cl)(Et3N)2] (2), based on the Trost bis-Pro-Phenol ligand (L) and encompassing different ligand labilities with coordination geometries similar to the active site of jack bean urease. Both mimetic complexes produced ammonia from urea, (1) and (2), were ten- and four-fold slower than urease, respectively. The presence and importance of several reaction intermediates were evaluated both experimentally and theoretically, indicating the aquo intermediate as a key intermediate, coordinating urea in an outer-sphere manner. Both complexes produced isocyanate, revealing an activated water molecule acting as a base. In addition, the reaction with different substrates indicated the biomimetic complexes were able to hydrolyze isocyanate. Thus, our results indicate that the formation of an outer-sphere complex in the urease analogues might be the reason urease performs a different mechanism.

Funder

FAPESP

Coordenação de Aperfeiçoamento de Pessoal de Nivel Superior- Brasil (CAPES) 001

Fundación Carolina

Publisher

MDPI AG

Subject

Chemistry (miscellaneous),Analytical Chemistry,Organic Chemistry,Physical and Theoretical Chemistry,Molecular Medicine,Drug Discovery,Pharmaceutical Science

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