RGGC-UNet: Accurate Deep Learning Framework for Signet Ring Cell Semantic Segmentation in Pathological Images

Author:

Zhao Tengfei1ORCID,Fu Chong123ORCID,Song Wei1ORCID,Sham Chiu-Wing4ORCID

Affiliation:

1. School of Computer Science and Engineering, Northeastern University, Shenyang 110819, China

2. Engineering Research Center of Security Technology of Complex Network System, Ministry of Education, Shenyang 110819, China

3. Key Laboratory of Intelligent Computing in Medical Image, Ministry of Education, Shenyang 110819, China

4. School of Computer Science, The University of Auckland, Auckland 1142, New Zealand

Abstract

Semantic segmentation of Signet Ring Cells (SRC) plays a pivotal role in the diagnosis of SRC carcinoma based on pathological images. Deep learning-based methods have demonstrated significant promise in computer-aided diagnosis over the past decade. However, many existing approaches rely heavily on stacking layers, leading to repetitive computational tasks and unnecessarily large neural networks. Moreover, the lack of available ground truth data for SRCs hampers the advancement of segmentation techniques for these cells. In response, this paper introduces an efficient and accurate deep learning framework (RGGC-UNet), which is a UNet framework including our proposed residual ghost block with ghost coordinate attention, featuring an encoder-decoder structure tailored for the semantic segmentation of SRCs. We designed a novel encoder using the residual ghost block with proposed ghost coordinate attention. Benefiting from the utilization of ghost block and ghost coordinate attention in the encoder, the computational overhead of our model is effectively minimized. For practical application in pathological diagnosis, we have enriched the DigestPath 2019 dataset with fully annotated mask labels of SRCs. Experimental outcomes underscore that our proposed model significantly surpasses other leading-edge models in segmentation accuracy while ensuring computational efficiency.

Funder

National Natural Science Foundation of China

Fundamental Research Funds for the Central Universities

Publisher

MDPI AG

Subject

Bioengineering

Reference36 articles.

1. Gnepp, D.R. (2009). Diagnostic Surgical Pathology of the Head and Neck, W.B. Saunders. [2nd ed.].

2. Benesch, M.G., and Mathieson, A. (2020). Epidemiology of Signet Ring Cell Adenocarcinomas. Cancers, 12.

3. Hamilton, S.R., and Aaltonen, L.A. (2000). Chapter 1—Tumours of the Oesophagus, IARC Press.

4. A semi-supervised deep convolutional framework for signet ring cell detection;Ying;Neurocomputing,2021

5. DigestPath: A benchmark dataset with challenge review for the pathological detection and segmentation of digestive-system;Da;Med. Image Anal.,2022

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