Robust Removal of Slow Artifactual Dynamics Induced by Deep Brain Stimulation in Local Field Potential Recordings Using SVD-Based Adaptive Filtering

Author:

Bahador Nooshin12,Saha Josh13,Rezaei Mohammad R.12,Utpal Saha1,Ghahremani Ayda14,Chen Robert156,Lankarany Milad1267

Affiliation:

1. Krembil Research Institute, University Health Network (UHN), 60 Leonard Ave, Toronto, ON M5T 0S8, Canada

2. Institute of Biomedical Engineering (BME), University of Toronto, Toronto, ON M5S 2E8, Canada

3. Department of Electrical and Computer Engineering, University of Waterloo, Toronto, ON N2L 3G1, Canada

4. School of Medicine, Stanford University, Stanford, CA 94305, USA

5. Department of Medicine, Division of Neurology, University of Toronto, Toronto, ON M5S 2E8, Canada

6. KITE Research Institute, Toronto Rehabilitation Institute, University Health Network (UHN), Toronto, ON M5G 2A2, Canada

7. Department of Physiology, University of Toronto, Toronto, ON M5S 2E8, Canada

Abstract

Deep brain stimulation (DBS) is widely used as a treatment option for patients with movement disorders. In addition to its clinical impact, DBS has been utilized in the field of cognitive neuroscience, wherein the answers to several fundamental questions underpinning the mechanisms of neuromodulation in decision making rely on the ways in which a burst of DBS pulses, usually delivered at a clinical frequency, i.e., 130 Hz, perturb participants’ choices. It was observed that neural activities recorded during DBS were contaminated with large artifacts, which lasts for a few milliseconds, as well as a low-frequency (slow) signal (~1–2 Hz) that can persist for hundreds of milliseconds. While the focus of most of methods for removing DBS artifacts was on the former, the artifact removal capabilities of the slow signal have not been addressed. In this work, we propose a new method based on combining singular value decomposition (SVD) and normalized adaptive filtering to remove both large (fast) and slow artifacts in local field potentials, recorded during a cognitive task in which bursts of DBS were utilized. Using synthetic data, we show that our proposed algorithm outperforms four commonly used techniques in the literature, namely, (1) normalized least mean square adaptive filtering, (2) optimal FIR Wiener filtering, (3) Gaussian model matching, and (4) moving average. The algorithm’s capabilities are further demonstrated by its ability to effectively remove DBS artifacts in local field potentials recorded from the subthalamic nucleus during a verbal Stroop task, highlighting its utility in real-world applications.

Funder

Natural Sciences and Engineering Council

J.P. Bickell foundation—medical research

Finnish Parkinson’s Foundation

Publisher

MDPI AG

Subject

Bioengineering

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