Mitochondrial DNA Haplogroups and Variants Predispose to Chagas Disease Cardiomyopathy

Author:

Gallardo Frédéric1,Brochet Pauline1ORCID,Goudenège David2,Nunes João Paulo Silva1345ORCID,Andrieux Pauline1,Ianni Barbara Maria3,Frade Amanda Farage345,Mady Charles3,Santos Ronaldo Honorato Barros6,Kuramoto Andreia3,Steffen Samuel67,Stolf Antonio Noedir7,Pomerantzeff Pablo8,Fiorelli Alfredo Inacio7,Bocchi Edimar Alcides79,Pissetti Cristina Wide10ORCID,Saba Bruno11,Dias Fabrício C.12,Sampaio Marcelo Ferraz11,Gaiotto Fabio Antônio67,Marin-Neto José Antonio12,Fragata Abílio11,Zaniratto Ricardo Costa Fernandes3ORCID,Siqueira Sergio13,Peixoto Giselle De Lima13,Bacal Fernando6ORCID,Buck Paula8,Almeida Rafael Ribeiro345,Lin-Wang Hui Tzu11,Schmidt André12ORCID,Hirata Mario Hiroyuki14ORCID,Donadi Eduardo Antonio12,Pereira Alexandre Costa8,Rodrigues Junior Virmondes10,Martinelli Martino13,Naslavsky Michel1516,Kalil Jorge345ORCID,Procaccio Vincent2,Cunha-Neto Edecio34517ORCID,Chevillard Christophe1ORCID

Affiliation:

1. Institut MarMaRa, Institut National de la Santé Et de la Recherche Médicale (INSERM), Unité Mixte de Recherche (UMR) U1090, Aix Marseille Université, TAGC Theories and Approaches of Genomic Complexity, Parc Scientifique de Luminy, Case 928, 163 Avenue de Luminy, 13288 Marseille, France

2. Department of Genetics, University Hospital of Angers, 49933 Angers, France

3. Laboratory of Immunology, Heart Institute Instituto do Coração (InCor), School of Medicine, University of São Paulo, São Paulo 05403-903, Brazil

4. Division of Clinical Immunology and Allergy, School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

5. Instituto Nacional de Ciência e Tecnologia, INCT, III-Institute for Investigation in Immunology, São Paulo 05403-003, Brazil

6. Division of Transplantation, Heart Institute Instituto do Coração (InCor), School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

7. Division of Surgery, Heart Institute Instituto do Coração (InCor), School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

8. Heart Institute (InCor), School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

9. Heart Failure Unit, Heart Institute Instituto do Coração (InCor), School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

10. Laboratory of Immunology, Universidade Federal Do Triângulo Mineiro (UFTM), Uberaba 48036-180, Brazil

11. Laboratório de Investigação Molecular em Cardiologia, Instituto de Cardiologia Dante Pazzanese (IDPC), São Paulo 04012-909, Brazil

12. School of Medicine of Ribeirão Preto, Faculdade de Medicina de Ribeirão Preto (FMRP), University of São Paulo, Ribeirão Preto 14049-900, Brazil

13. Pacemaker Clinic, Heart Institute Instituto do Coração (InCor), School of Medicine, University of São Paulo, São Paulo 05403-003, Brazil

14. Department of Clinical and Toxicological Analyses, Faculty of Pharmaceutical Sciences, University of São Paulo (USP), São Paulo 05508-000, Brazil

15. Human Genome and Stem Cell Research Center, Biosciences Institute, University of São Paulo, São Paulo 05508-090, Brazil

16. Hospital Israelita Albert Einstein, São Paulo 05652-900, Brazil

17. Laboratório de Imunologia, Instituto do Coração, Hospital das Clínicas, Faculdade de Medicina da Universidade de São Paulo, Av. Dr. Eneas de Carvalho Aguiar, 44-Bloco II, 9º andar, São Paulo 05403-003, Brazil

Abstract

Cardiomyopathies are major causes of heart failure. Chagas disease (CD) is caused by the parasite Trypanosoma cruzi, and it is endemic in Central and South America. Thirty percent of cases evolve into chronic chagas cardiomyopathy (CCC), which has worse prognosis as compared with other cardiomyopathies. In vivo bioenergetic analysis and ex vivo proteomic analysis of myocardial tissues highlighted worse mitochondrial dysfunction in CCC, and previous studies identified nuclear-encoded mitochondrial gene variants segregating with CCC. Here, we assessed the role of the mitochondrial genome through mtDNA copy number variations and mtDNA haplotyping and sequencing from heart or blood tissues of severe, moderate CCC and asymptomatic/indeterminate Chagas disease as well as healthy controls as an attempt to help decipher mitochondrial-intrinsic genetic involvement in Chagas disease development. We have found that the mtDNA copy number was significantly lower in CCC than in heart tissue from healthy individuals, while blood mtDNA content was similar among asymptomatic Chagas disease, moderate, and severe CCC patients. An MtDNA haplogrouping study has indicated that African haplogroups were over represented in the Chagas subject groups in comparison with healthy Brazilian individuals. The European lineage is associated with protection against cardiomyopathy and the macro haplogroup H is associated with increased risk towards CCC. Using mitochondria DNA sequencing, 84 mtDNA-encoded protein sequence pathogenic variants were associated with CCC. Among them, two variants were associated to left ventricular non-compaction and two to hypertrophic cardiomyopathy. The finding that mitochondrial protein-coding SNPs and mitochondrial haplogroups associate with risk of evolving to CCC is consistent with a key role of mitochondrial DNA in the development of chronic chagas disease cardiomyopathy.

Funder

Institut National de la Santé et de la Recherche Médicale

Aix-Marseille University

French Agency for Research

Inserm Cross-Cutting Project GOLD

Excellence Initiative of Aix-Marseille University-A*Midex a French “Investissements d’Avenir programme”-Institute MarMaRa

FAPESP

Brazilian National Research Council

CAPES-COFECUB program

Inserm’s PRI/IRP 2022 program

Publisher

MDPI AG

Subject

General Medicine

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