Peroxisomal NAD(H) Homeostasis in the Yeast Debaryomyces hansenii Depends on Two Redox Shuttles and the NAD+ Carrier, Pmp47

Author:

Turkolmez Selva1,Chornyi Serhii23ORCID,Alhajouj Sondos1ORCID,IJlst Lodewijk2,Waterham Hans R.234,Mitchell Phil J.1,Hettema Ewald H.1ORCID,van Roermund Carlo W. T.2

Affiliation:

1. School of Bioscience, University of Sheffield, Sheffield S10 2TN, UK

2. Laboratory Genetic Metabolic Diseases, Department of Clinical Chemistry, Amsterdam UMC, University of Amsterdam, Meibergdreef 9, 1105 AZ Amsterdam, The Netherlands

3. Amsterdam Gastroenterology Endocrinology Metabolism, Amsterdam, The Netherlands

4. Amsterdam Reproduction & Development, Amsterdam, The Netherlands

Abstract

Debaryomyces hansenii is considered an unconventional yeast with a strong biotechnological potential, which can produce and store high amounts of lipids. However, relatively little is known about its lipid metabolism, and genetic tools for this yeast have been limited. The aim of this study was to explore the fatty acid β-oxidation pathway in D. hansenii. To this end, we employed recently developed methods to generate multiple gene deletions and tag open reading frames with GFP in their chromosomal context in this yeast. We found that, similar as in other yeasts, the β-oxidation of fatty acids in D. hansenii was restricted to peroxisomes. We report a series of experiments in D. hansenii and the well-studied yeast Saccharomyces cerevisiae that show that the homeostasis of NAD+ in D. hansenii peroxisomes is dependent upon the peroxisomal membrane protein Pmp47 and two peroxisomal dehydrogenases, Mdh3 and Gpd1, which both export reducing equivalents produced during β-oxidation to the cytosol. Pmp47 is the first identified NAD+ carrier in yeast peroxisomes.

Funder

European Union’s Horizon 2020 Research and Innovation Program under Marie Skłodowska-Curie

Publisher

MDPI AG

Subject

Molecular Biology,Biochemistry

Reference43 articles.

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2. New Kids on the Block: Emerging Oleaginous Yeast of Biotechnological Importance;Yaguchi;AIMS Microbiol.,2017

3. Debaryomyces Hansenii—An Extremophilic Yeast with Biotechnological Potential;Breuer;Yeast,2006

4. de Figueiredo, P., Li, L., Nikolov, Z., Shaw, B.D., Dickman, M.B., Louzada, E.S., Sturino, J.M., and Chang, Y.Y. (2016). Transformation of Glycerol and Cellulosic Materials into High Energy Fuels. (9,340,768), U.S. Patents.

5. Alhajouj, S., Turkolmez, S., Abalkhail, T., Hadi, Z., Alwan, O., Gilmour, D.J., Mitchell, P.J., and Hettema, E.H. (2023). Efficient PCR-Based Gene Targeting in Isolates of the Non-Conventional Yeast Debaryomyces Hansenii. bioRxiv.

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