Interpretation of the Yak Skin Single-Cell Transcriptome Landscape

Author:

Zheng Qingbo12,Ye Na12,Bao Pengjia12ORCID,Wang Tong12,Ma Chaofan12,Chu Min12,Wu Xiaoyun12,Kong Siyuan3ORCID,Guo Xian12ORCID,Liang Chunnian12,Pan Heping4,Yan Ping125

Affiliation:

1. Key Laboratory of Animal Genetics and Breeding on Tibetan Plateau, Ministry of Agriculture and Rural Affairs, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Lanzhou 730050, China

2. Key Laboratory of Yak Breeding Engineering of Gansu Province, Lanzhou Institute of Husbandry and Pharmaceutical Sciences, Chinese Academy of Agricultural Sciences, Lanzhou 730050, China

3. Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen 518120, China

4. Life Science and Engineering College, Northwest Minzu University, Lanzhou 730030, China

5. Institute of Western Agriculture, The Chinese Academy of Agricultural Sciences, Changji 831100, China

Abstract

The morphogenesis of hair follicle structure is accompanied by the differentiation of skin tissue. Mammalian coats are produced by hair follicles. The formation of hair follicles requires signal transmission between the epidermis and dermis. However, knowledge of the transcriptional regulatory mechanism is still lacking. We used single-cell RNA sequencing to obtain 26,573 single cells from the scapular skin of yaks at hair follicle telogen and anagen stages. With the help of known reference marker genes, 11 main cell types were identified. In addition, we further analyzed the DP cell and dermal fibroblast lineages, drew a single-cell map of the DP cell and dermal fibroblast lineages, and elaborated the key genes, signals, and functions involved in cell fate decision making. The results of this study provide a very valuable resource for the analysis of the heterogeneity of DP cells and dermal fibroblasts in the skin and provide a powerful theoretical reference for further exploring the diversity of hair follicle cell types and hair follicle morphogenesis.

Funder

National Key Research Program

National Natural Science Foundation of China

National Beef Cattle Industry Technology and System

Agricultural Science and Technology Innovation Program

Science and Technology Aid Qinghai Cooperation Special Project

Shenzhen Science and Technology Program

Science and Technology program of Gansu Province

Publisher

MDPI AG

Subject

General Veterinary,Animal Science and Zoology

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