In vivo human neurite exchange time imaging at 500 mT/m diffusion gradients

Author:

Chan Kwok-Shing12ORCID,Ma Yixin12ORCID,Lee Hansol12ORCID,Marques José P.3ORCID,Olesen Jonas L.45ORCID,Coelho Santiago67ORCID,Novikov Dmitry S.67ORCID,Jespersen Sune N.45ORCID,Huang Susie Y.12ORCID,Lee Hong-Hsi12ORCID

Affiliation:

1. Athinoula A. Martinos Center for Biomedical Imaging, Charlestown, MA, United States

2. Department of Radiology, Massachusetts General Hospital, Harvard Medical School, Boston, MA, United States

3. Donders Institute for Brain, Cognition and Behaviour, Radboud University, Nijmegen, The Netherlands

4. Center of Functionally Integrative Neuroscience (CFIN) and MINDLab, Department of Clinical Medicine, Aarhus University, Aarhus, Denmark

5. Department of Physics and Astronomy, Aarhus University, Aarhus, Denmark

6. Center for Biomedical Imaging, Department of Radiology, New York University School of Medicine, New York, NY, United States

7. Center for Advanced Imaging Innovation and Research (CAI2R), Department of Radiology, New York University School of Medicine, New York, NY, United States

Abstract

Abstract Evaluating tissue microstructure and membrane integrity in the living human brain through diffusion water exchange imaging is challenging due to requirements for a high signal-to-noise ratio and short diffusion times dictated by relatively fast exchange processes. The goal of this work was to demonstrate the feasibility of in vivo imaging of tissue micro-geometries and water exchange within the brain gray matter using the state-of-the-art Connectome 2.0 scanner equipped with an ultra-high-performance gradient system (maximum gradient strength = 500 mT/m, maximum slew rate = 600 T/m/s). We performed diffusion MRI measurements in 15 healthy volunteers at multiple diffusion times (13–30 ms) and b-values up to 17.5 ms/μm2. The anisotropic Kärger model was applied to estimate the apparent exchange time between intra-neurite and extracellular water in gray matter. The estimated exchange time across the cortical ribbon was around (median ± interquartile range) 13 ± 8 ms on Connectome 2.0, substantially faster than that measured using an imaging protocol compatible with Connectome 1.0-alike systems on the same cohort. Our investigation suggested that the apparent exchange time estimation using a Connectome 1.0 compatible protocol was more prone to residual noise floor biases due to the small time-dependent signal contrasts across diffusion times when the exchange is fast (≤20 ms). Furthermore, spatial variation of exchange time was observed across the cortex, where the motor cortex, somatosensory cortex, and visual cortex exhibit longer apparent exchange times than other cortical regions. Non-linear fitting for the anisotropic Kärger model was accelerated 100 times using a GPU-based pipeline compared with the conventional CPU-based approach. This study highlighted the importance of the chosen diffusion times and measures to address Rician noise in diffusion MRI (dMRI) data, which can have a substantial impact on the estimated apparent exchange time and require extra attention when comparing the results between various hardware setups.

Funder

National Institute of Dental and Craniofacial Research

NIH

National Institute of Neurological Disorders and Stroke

National Institute of Biomedical Imaging and Bioengineering

National Center for Research Resources

National Institute on Aging

Lundbeck Foundation

Publisher

MIT Press

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