SurfinPES: Performing automated analysis of activation strain, energy decomposition, and reaction force

Author:

Quintal Alan1,Dzib Eugenia1,Murillo Fernando1,Ortíz‐Chi Filiberto2,Fernández Israel3,Merino Gabriel1ORCID

Affiliation:

1. Departamento de Física Aplicada Centro de Investigación y de Estudios Avanzados, Unidad Mérida Mérida Yucatán Mexico

2. Conahcyt División Académica de Ciencias Básicas Universidad Juárez Autónoma de Tabasco Cunduacán Tabasco Mexico

3. Departamento de Química Orgánica y Centro de Innovación en Química Avanzada (ORFEO‐CINQA) Facultad de Ciencias Químicas, Universidad Complutense Madrid Spain

Abstract

AbstractAnalyzing activation strain, energy decomposition, and reaction force models is crucial for studying chemical reactivity and gaining quantitative insights into the factors that control energy barriers. However, manually preparing and processing the necessary data can be challenging and prone to errors. To address this issue, we introduce SurfinPES, a Python‐based module in Eyringpy that automates data extraction and processing for these analyses. SurfinPES also allows monitoring of the evolution of primitive properties (geometrical and electronic) along the reaction coordinate. The module is user‐friendly with a simple input format, making it accessible to any user in the field of computational chemistry.

Funder

Consejo Nacional de Ciencia y Tecnología

Publisher

Wiley

Subject

Physical and Theoretical Chemistry,Condensed Matter Physics,Atomic and Molecular Physics, and Optics

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