Rapid and non‐invasive detection of cystic echinococcosis in sheep based on serum fluorescence spectrum combined with machine learning algorithms

Author:

Xu Shengke123,Dawuti Wubulitalifu24,Maimaitiaili Maierhaba23,Dou Jingrui2,Aizezi Malike5,Aimulajiang Kalibixiati23,Lü Xiaoyi6,Lü Guodong123ORCID

Affiliation:

1. College of Life Sciences and Technology, Xinjiang University Urumqi Xinjiang China

2. State Key Laboratory of Pathogenesis, Prevention, and Treatment of Central Asian High Incidence Diseases Clinical Medical Research Institute, The First Affiliated Hospital of Xinjiang Medical University Urumqi Xinjiang China

3. Xinjiang Key Laboratory of Echinococcosis The First Affiliated Hospital of Xinjiang Medical University Urumqi Xinjiang China

4. Department of Epidemiology and Biostatistics School of Public Health, Peking University Beijing China

5. Animal Health Supervision Institute of Xinjiang Uygur Autonomous Region Urumqi Xinjiang PR China

6. College of Software, Xinjiang University Urumqi Xinjiang China

Abstract

AbstractCystic echinococcosis (CE) is a grievous zoonotic parasitic disease. Currently, the traditional technology of screening CE is laborious and expensive, developing an innovative technology is urgent. In this study, we combined serum fluorescence spectroscopy with machine learning algorithms to develop an innovative screening technique to diagnose CE in sheep. Serum fluorescence spectra of Echinococcus granulosus sensu stricto‐infected group (n = 63) and uninfected E. granulosus s.s. group (n = 60) under excitation at 405 nm were recorded. The linear support vector machine (Linear SVM), Quadratic SVM, medium radial basis function (RBF) SVM, K‐nearest neighbor (KNN), and principal component analysis‐linear discriminant analysis (PCA‐LDA) were used to analyze the spectra data. The results showed that Quadratic SVM had the great classification capacity, its sensitivity, specificity, and accuracy were 85.0%, 93.8%, and 88.9%, respectively. In short, serum fluorescence spectroscopy combined with Quadratic SVM algorithm has great potential in the innovative diagnosis of CE in sheep.

Publisher

Wiley

Subject

General Physics and Astronomy,General Engineering,General Biochemistry, Genetics and Molecular Biology,General Materials Science,General Chemistry

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