DNABind: A hybrid algorithm for structure-based prediction of DNA-binding residues by combining machine learning- and template-based approaches-Reference-Cited by-同舟云学术

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DNABind: A hybrid algorithm for structure-based prediction of DNA-binding residues by combining machine learning- and template-based approaches

Published:2013-08-16 Issue:11 Volume:81 Page:1885-1899
ISSN:0887-3585
Container-title:Proteins: Structure, Function, and Bioinformatics
language:en
Short-container-title:Proteins

Author:

Liu Rong¹²,Hu Jianjun¹

Affiliation:

1. Department of Computer Science and Engineering; University of South Carolina; Columbia South Carolina 29208

2. Center for Bioinformatics; College of Life Science and Technology; Huazhong Agricultural University; Wuhan 430070 People's Republic of China

Funder

National Science Foundation Career Award

Publisher

Wiley

Subject

Molecular Biology,Biochemistry,Structural Biology

Link

http://onlinelibrary.wiley.com/wol1/doi/10.1002/prot.24330/fullpdf

Reference44 articles.

1. Homologous recombination is responsible for cell death in the absence of the Sgs1 and Srs2 helicases;Gangloff;Nat Genet,2000

2. The origin recognition complex interacts with a bipartite DNA binding site within yeast replicators;Rao;Proc Natl Acad Sci USA,1995

3. Characterization of HbpR binding by site-directed mutagenesis of its DNA-binding site and by deletion of the effector domain;Tropel;FEBS J,2005

4. Protein-DNA interactions: a structural analysis;Jones;J Mol Biol,1999

5. Analysis and prediction of DNA-binding proteins and their binding residues based on composition, sequence and structural information;Ahmad;Bioinformatics,2004

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