Structural Basis for the Activation of the Cobalt‐Carbon Bond and Control of the Adenosyl Radical in Coenzyme B12 Catalysis

Author:

Shibata Naoki1ORCID,Toraya Tetsuo2ORCID

Affiliation:

1. Department of Life Science Graduate School of Science University of Hyogo 3-2-1 Koto Kamigori-cho, Ako-gun Hyogo 678-1297 Japan

2. Department of Bioscience and Biotechnology Graduate School of Natural Science and Technology Okayama University Tsushima-naka Okayama 700-8530 Japan

Abstract

AbstractAdenosylcobalamin (AdoCbl), or coenzyme B12, is a naturally occurring organometallic compound that serves as a cofactor for enzymes that catalyze intramolecular group‐transfer reactions and ribonucleotide reduction in a wide variety of organisms from bacteria to animals. AdoCbl‐dependent enzymes are radical enzymes that generate an adenosyl radical by homolysis of the coenzyme's cobalt‐carbon (Co−C) bond for catalysis. How do the enzymes activate and cleave the Co−C bond to form the adenosyl radical? How do the enzymes utilize the high reactivity of the adenosyl radical for catalysis by suppressing undesirable side reactions? Our recent structural studies, which aimed to solve these problems with diol dehydratase and ethanolamine ammonia‐lyase, established the crucial importance of the steric strain of the Co−C bond and conformational stabilization of the adenosyl radical for coenzyme B12 catalysis. We outline here our results obtained with these eliminating isomerases and compare them with those obtained with other radical B12 enzymes.

Funder

Japan Society for the Promotion of Science

Sumitomo Foundation

Publisher

Wiley

Subject

Organic Chemistry,Molecular Biology,Molecular Medicine,Biochemistry

Reference111 articles.

1.  

2. B12(Ed. D. Dolphin) Wiley New York 1982;

3. Chemistry and Biochemistry of B12(Ed. R. Banerjee) Wiley New York 1999.

4.  

5. Purification and Properties of Dioldehydrase, an Enzyme Requiring a Cobamide Coenzyme

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