Predictors of disease severity in SARS‐CoV‐2 omicron variant XBB sublineages and variants of interest

Author:

Ngiam Jinghao Nicholas1,Ng Oon Tek23,Toh Matthias Paul Han Sim45,Gao Qi4,Soong Ai Jia4,Teo Joel Han Wen4,Low Shannon4,Vasoo Shawn23,Li Jia Hui6,Thoon Koh Cheng6,Oh Helen7,Pada Surinder Kaur M S8,Ooi Say Tat9,Soh Jade10,Wong Hei Man11,Tambyah Paul Anantharajah11213

Affiliation:

1. Division of Infectious Diseases National University Health System Singapore Singapore

2. Department of Infectious Diseases Tan Tock Seng Hospital and the National Centre for Infectious Diseases Singapore Singapore

3. Lee Kong Chian School of Medicine Nanyang Technological University Singapore Singapore

4. National Public Health and Epidemiology Unit National Centre for Infectious Diseases Singapore Singapore

5. Saw Swee Hock School of Public Health National University of Singapore Singapore Singapore

6. Department of Paediatrics, Infectious Disease Service KK Women's and Children's Hospital Singapore Singapore

7. Department of Infectious Diseases Changi General Hospital Singapore Singapore

8. Department of Infectious Diseases Ng Teng Fong General Hospital Singapore Singapore

9. Department of Infectious Diseases Khoo Teck Puat Hospital Singapore Singapore

10. Department of Infectious Diseases Sengkang General Hospital Singapore Singapore

11. Department of Infectious Diseases Singapore General Hospital Singapore Singapore Singapore

12. Department of Medicine, Yong Loo Lin School of Medicine National University of Singapore Singapore Singapore

13. Department of Medicine, Yong Loo Lin School of Medicine, Infectious Diseases Translational Research Programme National University of Singapore Singapore Singapore

Abstract

AbstractThe Omicron variant has been reported to present with milder disease compared with Delta, although this may be due to immunity from vaccination and prior exposure. Predictors of severity with recent strains have not been well characterized. We retrospectively examined consecutive cases of moderate‐to‐severe COVID‐19 (defined as requiring supplemental oxygenation, intensive care or mortality) admitted to seven tertiary hospitals across Singapore in April 2023. Whole genome sequencing was performed on each isolate to determine the sublineage, while baseline clinical, laboratory data and outcomes were tabulated. We reviewed 182 patients with moderate‐to‐severe illness and 466 controls hospitalized at the same time. Advanced age and presence of chronic kidney disease predicted adverse outcome. Previously reported markers such as radiographic evidence of pneumonia, elevated C‐reactive protein and serum creatinine levels at presentation also correlated with adverse outcomes. There were no observable differences in outcomes with any specific Omicron XBB sublineage. We did not find any specific Omicron XBB sublineage that was associated with worse outcomes. Larger multinational studies would be important to track the clinical evolution of the virus in its current endemic state.

Publisher

Wiley

Subject

Infectious Diseases,Virology

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