Protein Engineering and High‐Throughput Screening by Yeast Surface Display: Survey of Current Methods

Author:

Lopez-Morales Joanan123,Vanella Rosario13ORCID,Appelt Elizabeth A.4,Whillock Sarah5,Paulk Alexandra M.678,Shusta Eric V.49ORCID,Hackel Benjamin J.510ORCID,Liu Chang C.111278ORCID,Nash Michael A.123ORCID

Affiliation:

1. Institute for Physical Chemistry Department of Chemistry University of Basel Basel 4058 Switzerland

2. Swiss Nanoscience Institute University of Basel Basel 4056 Switzerland

3. Department of Biosystems Science and Engineering ETH Zurich Basel 4058 Switzerland

4. Department of Chemical and Biological Engineering University of Wisconsin-Madison Madison WI 53706 USA

5. Department of Biomedical Engineering University of Minnesota Minneapolis MN 55455 USA

6. Program in Mathematical, Computational, and Systems Biology University of California Irvine CA 92697‐2280 USA

7. Center for Synthetic Biology University of California Irvine CA 92697 USA

8. Department of Biomedical Engineering University of California Irvine CA 92697 USA

9. Department of Neurological Surgery University of Wisconsin-Madison Madison WI 53706 USA

10. Department of Chemical Engineering and Materials Science University of Minnesota Minneapolis MN 55455 USA

11. Department of Molecular Biology and Biochemistry University of California Irvine CA 92697 USA

12. Department of Chemistry University of California Irvine CA 92697 USA

Abstract

Yeast surface display (YSD) is a powerful tool in biotechnology that links genotype to phenotype. In this review, the latest advancements in protein engineering and high‐throughput screening based on YSD are covered. The focus is on innovative methods for overcoming challenges in YSD in the context of biotherapeutic drug discovery and diagnostics. Topics ranging from titrating avidity in YSD using transcriptional control to the development of serological diagnostic assays relying on serum biopanning and mitigation of unspecific binding are covered. Screening techniques against nontraditional cellular antigens, such as cell lysates, membrane proteins, and extracellular matrices are summarized and techniques are further delved into for expansion of the chemical repertoire, considering protein–small molecule hybrids and noncanonical amino acid incorporation. Additionally, in vivo gene diversification and continuous evolution in yeast is discussed. Collectively, these techniques enhance the diversity and functionality of engineered proteins isolated via YSD, broadening the scope of applications that can be addressed. The review concludes with future perspectives and potential impact of these advancements on protein engineering. The goal is to provide a focused summary of recent progress in the field.

Publisher

Wiley

Subject

General Earth and Planetary Sciences,General Environmental Science

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