Brain‐age prediction: Systematic evaluation of site effects, and sample age range and size

Author:

Yu Yuetong1,Cui Hao‐Qi1,Haas Shalaila S.2,New Faye2,Sanford Nicole1ORCID,Yu Kevin1,Zhan Denghuang3,Yang Guoyuan4,Gao Jia‐Hong5ORCID,Wei Dongtao6ORCID,Qiu Jiang6,Banaj Nerisa7,Boomsma Dorret I.8,Breier Alan9,Brodaty Henry10,Buckner Randy L.1112,Buitelaar Jan K.13,Cannon Dara M.14,Caseras Xavier15,Clark Vincent P.16,Conrod Patricia J.17,Crivello Fabrice18,Crone Eveline A.1920,Dannlowski Udo21,Davey Christopher G.22,de Haan Lieuwe23,de Zubicaray Greig I.24,Di Giorgio Annabella25,Fisch Lukas21,Fisher Simon E.2627ORCID,Franke Barbara272829,Glahn David C.30,Grotegerd Dominik21,Gruber Oliver31,Gur Raquel E.32,Gur Ruben C.32,Hahn Tim21,Harrison Ben J.22,Hatton Sean33,Hickie Ian B.33,Hulshoff Pol Hilleke E.23435,Jamieson Alec J.22ORCID,Jernigan Terry L.36,Jiang Jiyang10ORCID,Kalnin Andrew J.37,Kang Sim38,Kochan Nicole A.10,Kraus Anna21,Lagopoulos Jim33,Lazaro Luisa39,McDonald Brenna C.40,McDonald Colm14,McMahon Katie L.41,Mwangi Benson42,Piras Fabrizio7ORCID,Rodriguez‐Cruces Raul43,Royer Jessica43,Sachdev Perminder S.10ORCID,Satterthwaite Theodore D.32ORCID,Saykin Andrew J.40ORCID,Schumann Gunter4445,Sevaggi Pierluigi46,Smoller Jordan W.124748,Soares Jair C.42,Spalletta Gianfranco7ORCID,Tamnes Christian K.49,Trollor Julian N.1050,Van't Ent Dennis8,Vecchio Daniela7,Walter Henrik51,Wang Yang52ORCID,Weber Bernd53,Wen Wei10,Wierenga Lara M.19ORCID,Williams Steven C. R.54,Wu Mon‐Ju42,Zunta‐Soares Giovana B.42,Bernhardt Boris43ORCID,Thompson Paul55,Frangou Sophia12,Ge Ruiyang1,

Affiliation:

1. Djavad Mowafaghian Centre for Brain Health, Department of Psychiatry University of British Columbia Vancouver British Columbia Canada

2. Department of Psychiatry Icahn School of Medicine at Mount Sinai New York New York USA

3. School of Population and Public Health University of British Columbia Vancouver British Columbia Canada

4. Advanced Research Institute of Multidisciplinary Sciences, School of Medical Technology, School of Life Science Beijing Institute of Technology Beijing China

5. Center for MRI Research Peking University Beijing China

6. School of Psychology Southwest University Chongqing China

7. Laboratory of Neuropsychiatry, Department of Clinical and Behavioral Neurology IRCCS Santa Lucia Foundation Rome Italy

8. Department of Biological Psychology Vrije Universiteit Amsterdam Amsterdam The Netherlands

9. Department of Psychiatry Indiana University School of Medicine Indianapolis Indiana USA

10. Centre for Healthy Brain Ageing (CHeBA), Discipline of Psychiatry and Mental Health, School of Clinical Medicine University of New South Wales Sydney New South Wales Australia

11. Department of Psychology, Center for Brain Science Harvard University Boston Massachusetts USA

12. Department of Psychiatry, Massachusetts General Hospital Harvard Medical School Boston Massachusetts USA

13. Department of Cognitive Neuroscience Donders Institute for Brain, Cognition and Behaviour, Radboud University Medical Center Nijmegen The Netherlands

14. Centre for Neuroimaging & Cognitive Genomics (NICOG), Clinical Neuroimaging Laboratory, Galway Neuroscience Centre College of Medicine Nursing and Health Sciences, University of Galway Galway Ireland

15. Centre for Neuropsychiatric Genetics and Genomics, Division of Psychological Medicine and Clinical Neurosciences Cardiff University Cardiff UK

16. Psychology Clinical Neuroscience Center, Department of Psychology University of New Mexico Albuquerque New Mexico USA

17. Department of Psychiatry and Addiction Université de Montréal, CHU Ste Justine Montreal Quebec Canada

18. Institut des Maladies Neurodégénératives Université de Bordeaux Bordeaux France

19. Department of Psychology, Faculty of Social Sciences Leiden University Leiden The Netherlands

20. Erasmus School of Social and Behavioral Sciences Erasmus University Rotterdam Rotterdam The Netherlands

21. Institute for Translational Psychiatry University of Münster Münster Germany

22. Department of Psychiatry The University of Melbourne Melbourne Victoria Australia

23. Department of Psychiatry Amsterdam UMC Amsterdam The Netherlands

24. Faculty of Health, School of Psychology & Counselling Queensland University of Technology Brisbane Queensland Australia

25. Department of Mental Health and Addictions ASST Papa Giovanni XXIII Bergamo Italy

26. Language and Genetics Department Max Planck Institute for Psycholinguistics Nijmegen The Netherlands

27. Donders Institute for Brain, Cognition and Behaviour Radboud University Nijmegen The Netherlands

28. Department of Cognitive Neuroscience Radboud University Medical Center Nijmegen The Netherlands

29. Department of Human Genetics Radboud University Medical Center Nijmegen The Netherlands

30. Department of Psychiatry, Tommy Fuss Center for Neuropsychiatric Disease Research, Boston Children's Hospital Harvard Medical School Boston Massachusetts USA

31. Section for Experimental Psychopathology and Neuroimaging, Department of General Psychiatry Heidelberg University Heidelberg Germany

32. Department of Psychiatry University of Pennsylvania Philadelphia Pennsylvania USA

33. Brain and Mind Centre The University of Sydney Sydney New South Wales Australia

34. Department of Psychology Utrecht University Utrecht The Netherlands

35. Department of Psychiatry University Medical Center Utrecht Utrecht The Netherlands

36. Center for Human Development, Departments of Cognitive Science, Psychiatry, and Radiology University of California San Diego California USA

37. Department of Radiology The Ohio State University College of Medicine Columbus Ohio USA

38. West Region, Institute of Mental Health Singapore Singapore

39. Department of Child and Adolescent Psychiatry and Psychology Hospital Clínic, IDIBAPS, CIBERSAM, University of Barcelona Barcelona Spain

40. Department of Radiology and Imaging Sciences Indiana University School of Medicine Indianapolis Indiana USA

41. School of Clinical Sciences, Centre for Biomedical Technologies Queensland University of Technology Brisbane Queensland Australia

42. Louis A. Faillace, MD, Department of Psychiatry and Behavioral Sciences The University of Texas Health Science Center at Houston Houston Texas USA

43. McConnell Brain Imaging Centre McGill University Montreal Quebec Canada

44. Department of Psychiatry CCM, Charite Universitaetsmedizin Berlin Berlin Germany

45. Centre for Population Neuroscience and Stratified Medicine (PONS), ISTBI Fudan University Shanghai China

46. Department of Translational Biomedicine and Neuroscience University of Bari Aldo Moro Bari Italy

47. Center for Genomic Medicine Massachusetts General Hospital Boston Massachusetts USA

48. Center for Precision Psychiatry Massachusetts General Hospital Boston Massachusetts USA

49. PROMENTA Research Center, Department of Psychology University of Oslo Oslo Norway

50. Department of Developmental Disability Neuropsychiatry, School of Clinical Medicine University of New South Wales Sydney New South Wales Australia

51. Department of Psychiatry and Psychotherapy, Charité Universitätsmedizin Berlin Corporate Member of FU Berlin and Humboldt Universität zu Berlin Berlin Germany

52. Department of Radiology Medical College of Wisconsin Milwaukee Wisconsin USA

53. Institute for Experimental Epileptology and Cognition Research University of Bonn and University Hospital Bonn Bonn Germany

54. Department of Neuroimaging Institute of Psychiatry, Psychology and Neuroscience, King's College London London UK

55. Imaging Genetics Center, Mark and Mary Stevens Neuroimaging and Informatics Institute, Keck School of Medicine University of Southern California Marina del Rey California USA

Abstract

AbstractStructural neuroimaging data have been used to compute an estimate of the biological age of the brain (brain‐age) which has been associated with other biologically and behaviorally meaningful measures of brain development and aging. The ongoing research interest in brain‐age has highlighted the need for robust and publicly available brain‐age models pre‐trained on data from large samples of healthy individuals. To address this need we have previously released a developmental brain‐age model. Here we expand this work to develop, empirically validate, and disseminate a pre‐trained brain‐age model to cover most of the human lifespan. To achieve this, we selected the best‐performing model after systematically examining the impact of seven site harmonization strategies, age range, and sample size on brain‐age prediction in a discovery sample of brain morphometric measures from 35,683 healthy individuals (age range: 5–90 years; 53.59% female). The pre‐trained models were tested for cross‐dataset generalizability in an independent sample comprising 2101 healthy individuals (age range: 8–80 years; 55.35% female) and for longitudinal consistency in a further sample comprising 377 healthy individuals (age range: 9–25 years; 49.87% female). This empirical examination yielded the following findings: (1) the accuracy of age prediction from morphometry data was higher when no site harmonization was applied; (2) dividing the discovery sample into two age‐bins (5–40 and 40–90 years) provided a better balance between model accuracy and explained age variance than other alternatives; (3) model accuracy for brain‐age prediction plateaued at a sample size exceeding 1600 participants. These findings have been incorporated into CentileBrain (https://centilebrain.org/#/brainAGE2), an open‐science, web‐based platform for individualized neuroimaging metrics.

Funder

Avid Radiopharmaceuticals

Instituto de Salud Carlos III

Max Planck Instituut voor Psycholinguïstiek

Hersenstichting

Nederlandse Organisatie voor Wetenschappelijk Onderzoek

National Institutes of Health

Radboud Universitair Medisch Centrum

Vrije Universiteit Amsterdam

European Federation of Pharmaceutical Industries and Associations

Autism Speaks

Autistica

Simons Foundation Autism Research Initiative

National Institute for Health and Care Research

King's College London

Deutsche Forschungsgemeinschaft

National Institute of Mental Health

American Epilepsy Society

Epilepsy Foundation

General Electric

Norges Forskningsråd

Helse Sør-Øst RHF

National Health and Medical Research Council

Science for Equity, Empowerment and Development Division

U.S. Department of Energy

Canadian Institutes of Health Research

Publisher

Wiley

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