Plugging the leaks: antibiotic resistance at human–animal interfaces in low‐resource settings

Author:

Nadimpalli Maya L12,Stegger Marc345,Viau Roberto26,Yith Vuthy7,de Lauzanne Agathe8,Sem Nita7,Borand Laurence8,Huynh Bich‐tram910,Brisse Sylvain11,Passet Virginie11,Overballe‐Petersen Søren3,Aziz Maliha4,Gouali Malika712,Jacobs Jan1314,Phe Thong15,Hungate Bruce A1617,Leshyk Victor O1617,Pickering Amy J218,Gravey François1920,Liu Cindy M4,Johnson Timothy J21,Le Hello Simon121920,Price Lance B4

Affiliation:

1. Gangarosa Department of Environmental Health Emory Rollins School of Public Health Atlanta GA

2. Stuart B Levy Center for Integrated Management of Antimicrobial Resistance Tufts University Boston MA

3. Department of Bacteria, Parasites and Fungi Statens Serum Institut Copenhagen Denmark

4. Department of Environmental and Occupational Health, Milken Institute School of Public Health The George Washington University Washington DC

5. Antimicrobial Resistance and Infectious Diseases Laboratory, Harry Butler Institute Murdoch University Perth Australia

6. Department of Geographic Medicine and Infectious Diseases Tufts Medical Center Boston MA

7. Laboratory of Environment and Food Safety Institut Pasteur in Cambodia Phnom Penh Cambodia

8. Epidemiology and Public Health Unit Institut Pasteur in Cambodia Phnom Penh Cambodia

9. Université Paris‐Saclay, UVSQ, Inserm, Anti‐Infective Evasion and Pharmacoepidemiology Team, CESP Montigny le Bretonneux France

10. Institut Pasteur, Université Paris Cité Paris France

11. Institut Pasteur, Université Paris Cité, Biodiversity and Epidemiology of Bacterial Pathogens Paris France

12. Enteric Bacterial Pathogens Unit, Institut Pasteur Paris France

13. Institute of Tropical Medicine Antwerp Belgium

14. Department of Microbiology and Immunology KU Leuven Leuven Belgium

15. Sihanouk Hospital Center for Hope Phnom Penh Cambodia

16. Department of Biological Sciences Northern Arizona University Flagstaff AZ

17. Center for Ecosystem Science and Society Northern Arizona University Flagstaff AZ

18. Department of Civil and Environmental Engineering University of California–Berkeley Berkeley CA

19. Université de Caen Normandie, Université de Rouen Normandie, Inserm, DYNAMICURE UMR 1311, CHU Caen Caen France

20. Department of Bacteriology CHU Caen Caen France

21. Department of Veterinary and Biomedical Sciences University of Minnesota St Paul MN

Abstract

Antibiotic resistance is one of the greatest public health challenges of our time. International efforts to curb resistance have largely focused on drug development and limiting unnecessary antibiotic use. However, in areas where water, sanitation, and hygiene infrastructure is lacking, we propose that bacterial flow between humans and animals can exacerbate the emergence and spread of resistant pathogens. Here, we describe the consequences of poor environmental controls by comparing mobile resistance elements among Escherichia coli recovered from humans and meat in Cambodia, a middle‐income country with substantial human–animal connectivity and unregulated antibiotic use. We identified identical mobile resistance elements and a conserved transposon region that were widely dispersed in both humans and animals, a phenomenon rarely observed in high‐income settings. Our findings indicate that plugging leaks at human–animal interfaces should be a critical part of addressing antibiotic resistance in low‐ and especially middle‐income countries.

Publisher

Wiley

Subject

Ecology,Ecology, Evolution, Behavior and Systematics

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