Exome sequencing in a Romanian Bardet‐Biedl syndrome cohort revealed an overabundance of causal BBS12 variants

Author:

Khan Sheraz123,Focșa Ina Ofelia45,Budișteanu Magdalena678,Stoica Cristina49,Nedelea Florina410,Bohîlțea Laurențiu4,Caba Lavinia11,Butnariu Lăcrămioara1112,Pânzaru Monica1112,Rusu Cristina1112,Jurcă Claudia1314,Chirita‐Emandi Adela1516ORCID,Bănescu Claudia17,Abbas Wasim23,Sadeghpour Azita1819,Baig Shahid Mahmood2021,Bălgrădean Mihaela422,Davis Erica E.123ORCID

Affiliation:

1. Stanley Manne Children's Research Institute, Ann & Robert H. Lurie Children's Hospital of Chicago Chicago Illinois USA

2. Human Molecular Genetics Lab, Health Biotechnology Division National Institute for Biotechnology and Genetic Engineering (NIBGE‐C) Faisalabad Pakistan

3. Pakistan Institute of Engineering and Applied Sciences (PIEAS) Islamabad Pakistan

4. University of Medicine and Pharmacy “Carol Davila” Bucharest Romania

5. Cytogenomic Medical Laboratory Bucharest Romania

6. Psychiatry Research Laboratory “Prof. Dr. Alexandru Obregia” Clinical Hospital of Psychiatry Bucharest Romania

7. Medical Genetic Laboratory “Victor Babeș” National Institute of Pathology Bucharest Romania

8. Department of Medical Genetics, Faculty of Medicine “Titu Maiorescu” University Bucharest Romania

9. Department of Pediatrics Clinical Institute Fundeni Bucharest Romania

10. Genetics Department Clinical Hospital Filantropia Bucharest Romania

11. Department of Medical Genetics “Grigore T. Popa” University of Medicine and Pharmacy Iași Romania

12. Regional Medical Genetics Centre “Sf. Maria” Children's Hospital Iași Romania

13. Department of Genetics, Faculty of Medicine and Pharmacy University of Oradea Oradea Romania

14. Department of Pediatrics “Dr. Gavril Curteanu” Municipal Clinical Hospital Oradea Romania

15. Emergency Hospital for Children Louis Turcanu Regional Center of Medical Genetics Timis Timisoara Romania

16. Victor Babes University of Medicine and Pharmacy Timisoara Department of Microscopic Morphology Genetics, Center for Genomic Medicine Timisoara Romania

17. “George Emil Palade” University of Medicine, Pharmacy, Sciences and Technology Târgu Mureş Romania

18. Center for Human Disease Modeling Duke University Medical Center Durham North Carolina USA

19. Duke Precision Medicine Program, Department of Medicine, Division of General Internal Medicine Duke University Medical Center Durham NC USA

20. Pakistan Science Foundation (PSF) Islamabad Pakistan

21. Department of Biological and Biomedical Sciences Agha Khan University Karachi Karachi Pakistan

22. Department of Pediatrics and Pediatric Nephrology Emergency Clinical Hospital for Children “Maria Skłodowska Curie” Bucharest Romania

23. Department of Pediatrics and Department of Cell and Developmental Biology Feinberg School of Medicine, Northwestern University Chicago Illinois USA

Abstract

AbstractBardet‐Biedl syndrome (BBS), is an emblematic ciliopathy hallmarked by pleiotropy, phenotype variability, and extensive genetic heterogeneity. BBS is a rare (~1/140,000 to ~1/160,000 in Europe) autosomal recessive pediatric disorder characterized by retinal degeneration, truncal obesity, polydactyly, cognitive impairment, renal dysfunction, and hypogonadism. Twenty‐eight genes involved in ciliary structure or function have been implicated in BBS, and explain the molecular basis for ~75%–80% of individuals. To investigate the mutational spectrum of BBS in Romania, we ascertained a cohort of 24 individuals in 23 families. Following informed consent, we performed proband exome sequencing (ES). We detected 17 different putative disease‐causing single nucleotide variants or small insertion–deletions and two pathogenic exon disruptive copy number variants in known BBS genes in 17 pedigrees. The most frequently impacted genes were BBS12 (35%), followed by BBS4, BBS7, and BBS10 (9% each) and BBS1, BBS2, and BBS5 (4% each). Homozygous BBS12 p.Arg355* variants were present in seven pedigrees of both Eastern European and Romani origin. Our data show that although the diagnostic rate of BBS in Romania is likely consistent with other worldwide cohorts (74%), we observed a unique distribution of causal BBS genes, including overrepresentation of BBS12 due to a recurrent nonsense variant, that has implications for regional diagnostics.

Funder

Eunice Kennedy Shriver National Institute of Child Health and Human Development

National Institute of Diabetes and Digestive and Kidney Diseases

Higher Education Commision, Pakistan

Publisher

Wiley

Subject

Genetics (clinical),Genetics

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