Gestational age at birth influences protein and RNA content in human milk extracellular vesicles

Author:

Vahkal Brett123ORCID,Altosaar Illimar1,Tremblay Eric4,Gagné David4,Hüttman Nico5,Minic Zoran5,Côté Marceline123,Blais Alexandre12367,Beaulieu Jean‐François4,Ferretti Emanuela8

Affiliation:

1. Department of Biochemistry, Microbiology and Immunology University of Ottawa Ottawa Canada

2. uOttawa Centre for Infection, Immunity, and Inflammation Ottawa Canada

3. Ottawa Institute of Systems Biology Ottawa Canada

4. Department of Immunology and Cell Biology Université de Sherbrooke Sherbrooke Canada

5. Faculty of Science, John L. Holmes Mass Spectrometry Facility University of Ottawa Ottawa Canada

6. Brain and Mind Institute University of Ottawa Ottawa Canada

7. Éric Poulin Centre for Neuromuscular Disease Ottawa Canada

8. Department of Pediatrics, Division of Neonatology Children's Hospital of Eastern Ontario Ottawa Canada

Abstract

AbstractHuman milk extracellular vesicles (HM EVs) are proposed to protect against disease development in infants. This protection could in part be facilitated by the bioactive EV cargo of proteins and RNA. Notably, mothers birth infants of different gestational ages with unique needs, wherein the EV cargo of HM may diverge. We collected HM from lactating mothers within two weeks of a term or preterm birth. Following purification of EVs, proteins and mRNA were extracted for proteomics and sequencing analyses, respectively. Over 2000 protein groups were identified, and over 8000 genes were quantified. The total number of proteins and mRNA did not differ significantly between the two conditions, while functional bioinformatics of differentially expressed cargo indicated enrichment in immunoregulatory cargo for preterm HM EVs. In term HM EVs, significantly upregulated cargo was enriched in metabolism‐related functions. Based on gene expression signatures from HM‐contained single cell sequencing data, we proposed that a larger portion of preterm HM EVs are secreted by immune cells, whereas term HM EVs contain more signatures of lactocyte epithelial cells. Proposed differences in EV cargo could indicate variation in mother's milk based on infants’ gestational age and provide basis for further functional characterisation.

Funder

Canadian Institutes of Health Research

Ontario Ministry of Research and Innovation

Western Canada Research Grid

Alliance de recherche numérique du Canada

Canada Research Chairs

Publisher

Wiley

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