A Target Recycling Amplification Process for the Digital Detection of Exosomal MicroRNAs through Photonic Resonator Absorption Microscopy

Author:

Wang Xiaojing12ORCID,Shepherd Skye13,Li Nantao14,Che Congnyu13,Song Tingjie5,Xiong Yanyu142,Palm Isabella Rose13,Zhao Bin12,Kohli Manish6,Demirci Utkan7,Lu Yi5,Cunningham Brian T.1342ORCID

Affiliation:

1. Nick Holonyak Jr. Micro and Nanotechnology Laboratory University of Illinois at Urbana-Champaign Urbana IL 61801 USA

2. Carl R. Woese Institute for Genomic Biology University of Illinois at Urbana-Champaign Urbana IL 61801 USA

3. Department of Bioengineering University of Illinois at Urbana-Champaign Urbana IL 61801 USA

4. Department of Electrical and Computer Engineering University of Illinois at Urbana-Champaign Urbana IL 61801 USA

5. Department of Chemistry University of Illinois at Urbana-Champaign Urbana IL 61801 USA

6. Division of Oncology University of Utah School of Medicine, Huntsman Cancer Institute Salt Lake City 84112 USA

7. Canary Center at Stanford for Cancer Early Detection Bio Acoustic-MEMS in Medicine (BAMM) Laboratory Department of Radiology School of Medicine Stanford University Palo Alto CA 94304 USA

Abstract

AbstractExosomal microRNAs (miRNAs) have considerable potential as pivotal biomarkers to monitor cancer development, dis‐ease progression, treatment effects and prognosis. Here, we report an efficient target recycling amplification process (TRAP) for the digital detection of miRNAs using photonic resonator absorption microscopy. We achieve multiplex digital detection with sub‐attomolar sensitivity in 20 minutes, robust selectivity for single nucleotide variants, and a broad dynamic range from 1 aM to 1 pM. Compared with traditional qRT‐PCR, TRAP showed similar accuracy in profiling exosomal miRNAs derived from cancer cells, but also exhibited at least 31‐fold and 61‐fold enhancement in the limits of miRNA‐375 and miRNA‐21 detection, respectively. The TRAP approach is ideal for exosomal or circulating miRNA biomarker quantification, where the miRNAs are present in low concentrations or sample volume, with potentials for frequent, low‐cost, and minimally invasive point‐of‐care testing.

Funder

Foundation for the National Institutes of Health

Zhejiang University

Publisher

Wiley

Subject

General Chemistry,Catalysis

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