Systematic Analysis of Tissue‐Derived and Biofluid Extracellular Vesicle miRNAs Associated with Prostate Cancer

Author:

Larson Jeevan1,Ozen Mehmet Ozgun1,Kohli Manish2,Akin Demir1,Demirci Utkan13ORCID

Affiliation:

1. Department of Radiology Canary Center for Cancer Early Detection Bioacoustic MEMS in Medicine (BAMM) Labs Stanford University 94305 Stanford USA

2. Huntsman Cancer Institute University of Utah 84112 Salt Lake City USA

3. Department of Electrical Engineering (by courtesy) Stanford University 94305 Stanford USA

Abstract

AbstractExtracellular vesicles (EVs) are emerging as biomarker candidates for early detection of prostate cancer. Studies compare EV‐microRNA (miRNA) expression in individuals with prostate cancer (PCa) with cancer‐free samples for diagnostic purposes. The aim of this study is to review miRNA signatures to investigate the overlap between miRNAs enriched in PCa tissue and miRNAs enriched in EVs isolated from subjects with PCa biofluids (i.e., urine, serum, and plasma). Signatures dysregulated in EVs from PCa biofluids and tissue are potentially associated with the primary tumor site and might be more indicative of PCa at an early stage. A systematic review of EV‐derived miRNAs and a reanalysis of PCa tissue miRNA sequencing data for comparison is presented. Articles in the literature are screened for validated miRNA dysregulation in PCa and compared with TCGA primary PCa tumor data using DESeq2. This resulted in 190 dysregulated miRNAs being identified. Thirty‐one eligible studies are identified, indicating 39 dysregulated EV‐derived miRNAs. The top ten markers identified as significantly dysregulated in the PCa tissue dataset TCGA (e.g., miR‐30b‐3p, miR‐210‐3p, miR‐126‐3p, and miR‐196a‐5p) have a significant expression change in EVs with the same directionality in one or several statistically significant results. This analysis highlights several less frequently studied miRNAs in PCa literature.

Publisher

Wiley

Subject

General Biochemistry, Genetics and Molecular Biology,Biomedical Engineering,Biomaterials

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