Acquired stress resilience through bacteria‐to‐nematode interdomain horizontal gene transfer

Author:

Pandey Taruna1,Kalluraya Chinmay A2ORCID,Wang Bingying1,Xu Ting3,Huang Xinya3,Guang Shouhong3ORCID,Daugherty Matthew D2ORCID,Ma Dengke K14ORCID

Affiliation:

1. Cardiovascular Research Institute and Department of Physiology University of California San Francisco San Francisco CA USA

2. Department of Molecular Biology University of California San Diego CA USA

3. Division of Life Sciences and Medicine, Department of Obstetrics and Gynecology, The USTC RNA Institute, Ministry of Education Key Laboratory for Membraneless Organelles & Cellular Dynamics, School of Life Sciences, The First Affiliated Hospital of USTC, Biomedical Sciences and Health Laboratory of Anhui Province University of Science and Technology of China Hefei China

4. Innovative Genomics Institute University of California Berkeley CA USA

Abstract

AbstractNatural selection drives the acquisition of organismal resilience traits to protect against adverse environments. Horizontal gene transfer (HGT) is an important evolutionary mechanism for the acquisition of novel traits, including metazoan acquisitions in immunity, metabolic, and reproduction function via interdomain HGT (iHGT) from bacteria. Here, we report that the nematode gene rml‐3 has been acquired by iHGT from bacteria and that it enables exoskeleton resilience and protection against environmental toxins in Caenorhabditis elegans. Phylogenetic analysis reveals that diverse nematode RML‐3 proteins form a single monophyletic clade most similar to bacterial enzymes that biosynthesize L‐rhamnose, a cell‐wall polysaccharide component. C. elegans rml‐3 is highly expressed during larval development and upregulated in developing seam cells upon heat stress and during the stress‐resistant dauer stage. rml‐3 deficiency impairs cuticle integrity, barrier functions, and nematode stress resilience, phenotypes that can be rescued by exogenous L‐rhamnose. We propose that interdomain HGT of an ancient bacterial rml‐3 homolog has enabled L‐rhamnose biosynthesis in nematodes, facilitating cuticle integrity and organismal resilience to environmental stressors during evolution. These findings highlight a remarkable contribution of iHGT on metazoan evolution conferred by the domestication of a bacterial gene.

Funder

Baker Foundation

National Institute of General Medical Sciences

Sandler Foundation

Publisher

Springer Science and Business Media LLC

Subject

General Immunology and Microbiology,General Biochemistry, Genetics and Molecular Biology,Molecular Biology,General Neuroscience

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