Affiliation:
1. Department of Biotechnology, Transcriptome Laboratory, Centre for Emerging Diseases, Jaypee Institute of
Information Technology, A-10, Sector-62, Noida, Uttar Pradesh 201309, India
Abstract
Background:
Diabetes mellitus, a common metabolic disorder that causes high blood
glucose, is due to impaired insulin secretion. Prolonged high blood sugar is associated with heart
disease. Many proteins are involved in metabolic pathways and contractility of cardiac cells regulate
cardiac hypertrophy, altering normal cardiac physiology and function. Moreover, microRNAs are
essential regulators of these proteins. Thus, there is a need to study the protein and microRNA
alterations in cardiomyocytes to better understand the mechanisms activated during cardiac stress.
Objective:
The study aims to profile differentially expressed sarcomere proteins in H9C2 cell lines
under high glucose conditions compared with normal conditions, along with the identification of
miRNAs regulating these proteins.
Methods:
Cardiac myoblast cell lines were treated with D-Glucose at three concentrations (10 mM,
25 mM, and 50 mM). Total cell protein was analyzed by Tandem Mass spectrometry Nano LCMS/
MS. Furthermore, next-generation sequencing data were analyzed for detecting microRNAs
regulating cardiac cell protein expression. Bioinformatics databases such as Uniprot, Ingenuity
Pathway Analysis (IPA), PANTHER, and Target scan were used.
Results:
The Nano LC-MS/MS analysis showed 2891 protein, 1351 protein groups, and 4381
peptide groups in both glucose-treated and control samples. Most proteins were metabolite
interconversion enzymes, translation proteins, and proteins regulating the cytoskeleton. IPA
analysis revealed differentially expressed proteins involved in EIF2 signaling, actin cytoskeleton
signaling, cardiac fibrosis, and cell death. Moreover, the proteins troponin, tropomyosin, myosin,
alpha-actin, and ATP synthase were found to be downregulated, thus responsible for altering
sarcomere protein expression. Rno-mir-92b-5p was observed to be highly upregulated at 50 mM.
Its target genes namely TPM2, ATP1A2, and CORO1C were mostly components of the sarcomere
complex and its regulators.
Conclusion:
A combination of proteomic profile and microRNA profile of hyperglycemic cells
provides an insight into advanced therapeutics. Our study has highlighted the role of sarcomere
proteins, activation of Eukaryotic Initiation Factor 2 (EIF2) signaling, and suppression of actin
cytoskeleton signaling in the pathophysiology of cardiomyopathy. MiR-92b-5p has an important
role in regulating sarcomere protein complex activated.
Funder
Department of Science and Technology- Science and Engineering Research Board, Government of India
Publisher
Bentham Science Publishers Ltd.
Subject
Biochemistry,General Medicine,Structural Biology